OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [G:0178] and [T:0201]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	-0.1	0	0.1	-0.1	-0.1	0	0.2	-0.2	-0.3	0.5	-0.6	-0.1	-0.1	-0.1	0.2	0.3	0.4	-0.3	0
F	-0.5	-0.1	0	-0.1	-0.1	0.3	-0.1	-0.2	-0.6	-0.3	0.7	0.1	-0.3	0.2	0.7	-0.7	0.3	0.5	0.4	0
I	-0.5	0.5	0.3	-0.2	0.1	-0.1	-0.1	0.4	0.2	-0.2	0.6	0.3	0	0.5	-0.3	-0.6	0	-0.1	-0.4	-0.1
L	-0.6	-0.2	0.2	0.8	-0.2	-0.2	-0.2	0	0	0	0.2	1.1	1	-0.4	0.1	-0.2	-0.1	-0.5	0.1	-0.2
V	0	0.5	-0.1	-0.1	-0.3	-0.3	0.7	-0.2	0.4	0.1	0.3	0.2	0.1	-0.6	0.2	-0.6	0.1	-0.1	0	-0.2
M	-0.1	0	0	0.3	-0.1	-0.1	-0.1	0.2	-0.2	0.3	-0.2	0.1	0	-0.2	0.6	-0.3	-0.4	0	0.2	0
W	0.2	0	0	-0.1	0	0.4	0	0	-0.2	-0.3	-0.2	-0.3	0.6	0.2	-0.3	0.5	-0.4	-0.1	-0.1	0
Y	-0.5	-0.1	-0.1	0.2	-0.1	-0.1	0.3	0.1	-0.7	-0.2	0.8	-0.2	0.7	0.6	0	-0.3	-0.2	0.5	-0.2	-0.1
D	0.2	-0.1	-0.1	-0.1	-0.1	-0.1	0	-0.2	0.8	0.1	-0.1	0.6	0.2	-0.2	-0.2	0.4	-0.7	0.2	-0.1	-0.1
E	0.2	0	-0.1	0.1	-0.2	0.2	-0.1	-0.1	-0.3	-0.5	0.6	1.1	-0.5	0.9	-0.1	0.4	-0.4	-0.4	-0.1	-0.1
K	-0.3	-0.1	0	-0.3	-0.1	0.5	-0.1	-0.3	1.8	0.9	-0.7	-1	-0.6	0.4	-0.3	-0.1	0.6	-0.1	-0.2	-0.1
R	0.6	-0.3	-0.2	-0.8	0.5	-0.5	-0.2	-0.2	1.1	0.9	-0.8	-0.6	-0.1	0.2	-0.7	0.5	0.6	-0.2	0.3	-0.2
H	0.3	-0.1	-0.1	0.5	0.3	-0.1	-0.1	0.1	-0.6	-0.1	-0.4	-0.5	-0.3	-0.3	-0.3	0	1.1	-0.3	0.4	-0.1
N	-0.1	-0.1	0.1	0.6	0	0	0	-0.2	-0.1	-0.2	0.5	-0.4	0.2	0.1	-0.1	0.4	-0.3	0.2	-0.1	0
Q	0.7	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	0.1	-0.2	-0.4	0.5	0.4	0	0.4	-0.4	-0.1
S	0.7	0	0	-0.3	0	0	0	-0.1	-0.2	0.3	-0.3	0.2	0.2	-0.2	0.2	-0.3	-0.1	-0.1	-0.2	0
T	0	-0.1	-0.1	0	-0.2	0.2	-0.1	0.2	0.2	0.4	-0.1	0.1	-0.3	-0.1	0.2	0	0.4	-0.6	0.5	-0.1
G	0.3	-0.1	-0.1	-0.4	0.4	-0.1	-0.1	0	-0.3	-0.2	-0.4	0.6	-0.1	-0.4	-0.1	0.7	0.2	0.9	-0.2	-0.1
P	-0.2	0	0	-0.1	0	0	0	0	-0.1	-0.2	-0.1	0	-0.1	-0.1	0.1	0.4	-0.2	-0.1	0.3	0.1
C	-0.2	0	0	0.3	0	0	0	-0.1	0.3	0.1	-0.1	-0.2	-0.1	-0.1	0.5	-0.3	-0.2	-0.1	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0178	0.2	0.2	-0.3	0.9	-0.3	-0.4	-0.9	0.3	0.8	0.8	-0.8	-0.2	0	0	0.2	-0.1	0.1	0.8	-0.7	-0.7
0201	0.1	-0.8	-0.9	0.4	-0.8	-0.7	-0.8	-0.5	0.9	1	0.5	0.5	0.1	0.5	0.3	0.6	0.3	1	-0.5	-1.2

Select residue pair below:

i_j	Score	Prob
0198_0201	1.762	1.00
0178_0201	1.606	1.00
0057_0201	1.381	0.99
0055_0201	1.348	0.99

Local Interactions:

i_j	Score	Prob
0201_0203	1.541	1.00
0200_0201	0.978	0.91
0201_0202	0.758	0.70
0199_0201	0.615	0.46

See all coupling residues
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