OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [G:0178] and [G:0200]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	0	-0.1	-0.1	0.5	0	0	0	-0.4	0.5	0.1	0.3	-0.2	0.1	0.2	-0.6	-0.3	0.7	0.1	0
F	-0.3	0	0.2	0.4	-0.1	-0.1	0	0	0.3	0.7	-0.3	0.1	0.1	0.2	-0.6	-0.2	-0.3	0.4	-0.1	0
I	-0.2	0	-0.1	-0.3	0	0	-0.1	0	-0.1	0.3	0	-0.5	0.4	-0.2	0.7	0.4	-0.2	-0.8	0	0
L	0.6	-0.1	-0.2	0.3	0.8	0.1	-0.1	-0.1	0.2	0.4	-0.2	-0.7	-0.2	-0.8	0.6	0.2	-0.6	-0.4	0.1	-0.1
V	-0.1	-0.1	0.2	-0.4	-0.2	-0.1	-0.1	-0.1	-0.2	0.6	0	0	0.1	-0.3	0.2	-0.1	-0.5	-0.1	0.4	-0.1
M	0.2	0	-0.1	-0.1	-0.1	0	0	0	0.2	0.3	-0.4	-0.4	-0.1	-0.3	0.2	0.4	0.3	-0.2	-0.1	0
W	0.2	0	-0.1	-0.1	-0.1	0	0	0	0.5	-0.2	-0.3	0.4	-0.1	-0.1	-0.3	0.1	-0.2	-0.1	-0.1	0
Y	0.2	0	-0.2	0	-0.2	-0.1	-0.1	-0.1	0.1	0	0.1	-0.6	0.8	0.7	0.2	-0.6	0.1	-0.1	0.1	0
D	0	-0.1	-0.1	0.3	-0.1	-0.1	-0.1	-0.1	0.1	-0.1	0.8	0.5	-0.1	-0.1	-0.1	-0.4	-0.1	-0.5	0.1	-0.1
E	0.1	-0.1	-0.2	-0.2	0	-0.1	-0.1	-0.1	-1	-1	0.3	1.4	0.4	0.4	-0.4	0.9	0.2	0.1	0.1	-0.1
K	-0.3	-0.1	-0.2	-0.4	0.4	0.1	-0.1	-0.1	0.1	0.1	-0.6	-0.6	0.1	0	0.2	0.4	0.6	0.2	0.4	-0.1
R	0.7	0	-0.2	0	-0.5	-0.2	-0.3	-0.2	0.9	0.1	0.1	-0.1	-0.4	0	-0.2	0.2	0	0.7	-0.4	-0.2
H	-0.7	-0.1	0.1	0.8	-0.4	-0.1	-0.1	-0.1	-0.3	-0.2	0.3	-0.1	-0.3	0	-0.9	0.1	1.2	0.7	0	-0.1
N	0	0	0	-0.1	-0.1	0	0	0	0	0	0.7	0.1	0.2	0.1	0.1	0.1	-0.3	-0.4	-0.1	0
Q	-0.3	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	0	-0.1	0.2	0.1	-0.2	-0.4	0.4	0.6	0.3	-0.2	-0.2	0	0.4
S	0.1	0	0.1	-0.2	-0.1	0	0	0	-0.4	0.3	-0.2	0.2	0.2	0.5	-0.5	-0.5	0.2	0.3	0.2	0
T	0.1	0.1	0.2	-0.3	0.2	-0.1	0.2	0.1	0.3	0	0.2	0.2	-0.4	0	0.4	-0.2	-0.3	-0.4	-0.3	-0.1
G	0.5	-0.1	-0.1	-0.1	-0.1	0	0.4	-0.1	0	-0.7	0.5	0.1	-0.3	-0.2	0.1	0.1	0.8	0.4	-0.4	0
P	0.1	0	0.4	0	0	0	0	0	-0.2	-0.1	-0.1	0.2	0	-0.1	-0.2	-0.1	-0.2	0.1	0	0
C	0.1	0	0	-0.1	0	0	0	0	-0.1	-0.3	-0.3	-0.1	-0.1	-0.2	0.4	0.1	0	0.2	0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0178	0.2	0.2	-0.3	0.9	-0.3	-0.4	-0.9	0.3	0.8	0.8	-0.8	-0.2	0	0	0.2	-0.1	0.1	0.8	-0.7	-0.7
0200	0.8	-1.3	-0.8	-0.4	-0.6	-1.2	-1.2	-1.1	1.5	1.6	0.8	0.2	0	0.6	0.8	0.5	0.5	0.5	-0.1	-1.2

Select residue pair below:

i_j	Score	Prob
0057_0178	1.718	1.00
0178_0201	1.606	1.00
0178_0200	1.163	0.97
0178_0198	1.160	0.97
0053_0178	0.732	0.66
0079_0178	0.630	0.49
0055_0178	0.579	0.40
0175_0178	0.569	0.39

Local Interactions:

i_j	Score	Prob
0177_0178	1.144	0.97
0176_0178	0.715	0.63

See all coupling residues
Download raw data

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