May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [P:0171] and [A:0238]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0.3 -0.1 0 -0.3 -0.2 -0.1 0 -0.1 0.1 0 0.6 0.2 -0.7 -0.2 0.3 -0.1 -0.2 -0.5 0.1
F -0.5 0 0 0 0 0 0 0 0.2 -0.2 0.2 0.3 0 -0.1 -0.1 0.1 -0.1 -0.2 -0.1 0
I -0.4 0 0 0 0 0 0 0 0.6 -0.2 -0.2 -0.1 0 -0.1 -0.1 -0.2 -0.1 0.3 0 0
L -0.1 -0.1 -0.1 0.2 0.3 -0.1 0 0 -0.4 0.2 -0.1 0.6 -0.2 0.2 0 -0.4 0 0 0.3 0
V -0.1 0 0 -0.1 -0.1 0 0 0 -0.1 -0.1 0.5 -0.2 -0.1 0.1 -0.3 0 0.4 -0.2 -0.1 0
M 0.4 0 0 -0.1 -0.1 0 0 0 -0.3 -0.4 0 0.1 -0.1 0 0 -0.2 0 0.4 0.1 0
W -0.1 0 0 0 0 0 0 0 0.3 -0.1 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0
Y 0.7 0 0 0.1 -0.1 -0.1 0 0 0.2 -0.5 -0.2 -0.2 -0.1 0.1 0.4 -0.5 -0.4 0.1 -0.1 0
D 0.1 0.4 0.5 0 0 -0.2 0 -0.2 0.3 0.3 -0.1 0 -0.2 0.1 0.2 -0.2 -0.1 0.2 0.8 0.1
E 0.3 -0.4 -0.4 0.1 -0.1 0.3 -0.2 -0.1 0.3 0.4 0.1 -0.1 0.1 0.2 -0.6 0.7 -0.3 0.2 0.2 0.2
K 0 0 0.3 0.1 -0.3 -0.2 -0.1 0 -0.1 -0.2 0.6 -0.5 -0.3 0.6 0.6 0.8 -0.7 0 0.2 -0.1
R 0.4 -0.1 -0.1 -0.3 -0.3 -0.2 -0.1 0 0.6 0.8 -0.4 -0.2 -0.2 0 -0.4 -0.1 0 0.3 0.3 -0.1
H 0.3 -0.1 -0.1 0.2 -0.2 -0.1 0 0 0 -0.3 0 -0.4 0.6 -0.1 0.3 0.4 0.4 -0.3 -0.3 -0.1
N -0.5 -0.1 -0.1 -0.2 0.6 -0.1 0 0 0.2 0.1 0.5 -0.6 -0.2 -0.1 0.4 -0.1 0.6 -0.1 0.1 -0.1
Q -0.4 -0.2 -0.2 0.3 -0.4 0.7 -0.1 -0.1 0.2 -0.4 0.4 0.4 0.1 0.2 0.3 -0.7 0 0 -0.1 0
S 0.1 0.2 -0.2 -0.4 0.8 -0.2 -0.1 -0.1 -0.2 0.4 -0.1 -0.4 0 0.2 0.1 0.7 -0.1 -0.4 -0.2 -0.1
T 0.2 -0.1 -0.1 -0.3 -0.2 0.2 0 0 -0.3 0.6 -0.1 -0.5 0.1 0.4 -0.1 -0.2 0.3 0.1 -0.1 -0.1
G 0.2 0 -0.2 0.1 -0.1 -0.3 -0.1 0 0.1 0.4 -0.3 0.2 -0.1 -0.7 -0.3 -0.1 0.1 0.6 0.4 -0.1
P 0.3 -0.1 -0.1 -0.3 0.1 0.7 -0.1 0 -0.4 -0.9 -0.2 1 0.5 0.1 0 0.1 0.4 0.1 -0.4 -0.1
C -0.3 0 0 0 0 0 0 0 -0.1 -0.1 -0.1 0.3 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0171 0.6 -1.6 -1.7 -0.1 -1 -0.8 -1.8 -0.8 2.2 1.8 0.3 0.5 -0.1 0 1.1 0.8 0.3 0.9 0.6 -1.9
0238 1.7 -1.2 -1.4 -0.7 -0.7 -0.9 -1.6 -1.8 1.4 1.1 1.1 0.7 -0.6 0.7 1.1 1.1 0.8 1.1 -0.4 -1.4
Select residue pair below:
i_j Score Prob
0235_0238 1.753 1.00
0234_0238 1.485 1.00
0171_0238 0.597 0.43
Local Interactions:
i_j Score Prob
0237_0238 0.634 0.49
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0145 seconds.