OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [M:0154] and [Q:0158]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	0.7	-0.3	0.7	-0.4	-0.2	0.1	0.6	0	0.1	-0.3	0	-0.2	-0.2	0.2	-0.1	0	-0.2	0	-0.1
F	-0.2	-0.4	0.5	0.5	0.4	-0.2	-0.2	-0.1	0	0.2	0.3	-0.6	-0.3	0.3	0.7	-0.4	-0.4	-0.3	0.8	-0.1
I	-0.5	0.3	-0.3	0	-0.3	0.3	-0.1	-0.1	-0.4	-0.1	1.4	0.4	-0.2	0.1	0.4	-0.1	0.3	-0.2	-0.6	0
L	-0.8	-0.1	0.9	-0.1	0.9	-0.3	0.1	-0.2	-0.2	0.2	0.3	0.1	-0.4	0.2	0.1	-0.1	-0.2	-0.4	-0.2	-0.1
V	0.5	-0.3	0	-0.4	0.2	0.9	-0.2	-0.1	-0.7	-0.3	0.7	0.2	0.2	-0.2	-0.4	-0.2	-0.2	0.1	0.4	0
M	0.1	0.5	-0.2	-0.2	-0.2	-0.1	0.3	-0.1	0.1	-0.1	0.1	0	-0.1	-0.3	0.2	-0.4	0	0.2	0	0
W	-0.3	-0.1	-0.1	-0.1	-0.1	0	0	0	0	0.4	0.1	-0.1	-0.1	0.3	-0.2	-0.2	-0.2	-0.1	-0.2	0
Y	0.1	-0.2	-0.1	0.7	-0.2	-0.1	-0.1	-0.1	0	0.4	0.3	-0.3	-0.1	0.3	0.3	-0.4	-0.4	-0.2	-0.1	0
D	-0.3	-0.3	-0.3	-0.1	-0.5	0	0.2	-0.4	-0.3	-0.1	0	1.1	-0.3	0.1	-0.1	0.3	1	1	0	-0.1
E	0.6	-0.1	-0.6	0.3	-0.4	-0.4	-0.2	-0.4	0	0.1	0.4	0.1	0.2	-0.1	0.1	0.9	0.3	-0.3	0	-0.1
K	-0.3	-0.1	0.5	-0.2	-0.7	-0.3	-0.3	0.2	0.4	-0.3	0.4	-0.2	-0.5	0.3	0.1	0.4	0.6	0	0	-0.1
R	0.5	-0.2	-0.3	-0.4	0.1	0	0.2	0.3	0.9	-0.1	-0.7	-0.3	-0.5	0.2	-0.2	0	0.1	0.3	1	-0.1
H	-0.3	-0.3	-0.2	-0.3	0.1	-0.1	-0.1	0.1	0.5	0.4	-0.1	-0.1	0	0	0.1	-0.5	-0.4	-0.2	0.8	0
N	-0.1	0	-0.1	-0.1	0.3	-0.2	-0.2	-0.1	0.2	0.2	0	-0.6	-0.3	-0.3	-0.3	0.4	0.5	0.5	-0.3	0
Q	0	0.3	-0.4	-0.5	-0.3	0.1	-0.2	0.2	1	0.2	-0.3	-0.2	0.9	0.3	0.2	0.1	-0.5	-0.4	0.1	-0.1
S	0	0	-0.5	-0.1	0.2	0.4	0.6	0.2	-0.3	0.2	0	0.2	-0.4	-0.1	-0.6	0.4	0.7	-0.2	-0.8	-0.1
T	0.5	-0.1	0.2	0.1	0.2	0.5	-0.2	-0.1	-0.4	0	-0.7	-0.1	-0.3	0.1	-0.4	0.4	-0.2	0	0.5	-0.1
G	-0.2	-0.2	1.1	0.2	0.5	-0.3	0.4	-0.2	-0.1	-0.1	-0.5	0.9	-0.1	-0.5	0.2	-0.7	-0.3	-0.5	0	-0.1
P	0.7	0.8	-0.6	-0.3	-0.2	0	-0.4	-0.3	0.1	-0.2	-0.3	0.7	0.9	-0.2	0.2	0.6	0.2	-0.2	-0.9	0.3
C	-0.2	-0.1	-0.1	-0.1	-0.1	0	0.4	0	0.1	0	-0.2	-0.1	-0.1	-0.1	-0.2	0.3	-0.1	-0.1	-0.2	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0154	0.9	-0.2	-0.6	0.5	-0.1	-0.9	-1.6	-0.9	1.1	0.8	0.6	0.7	-0.8	-0.2	0.3	0.2	0	0.2	0.8	-1.9
0158	1.1	-0.4	-0.4	-0.2	-0.2	-1.1	-1.1	-1.6	1.4	1.5	0.8	0.3	-0.7	0.1	0.7	0.6	0.4	-0.5	0.7	-2.3

Select residue pair below:

i_j	Score	Prob
0138_0154	0.609	0.45
0154_0158	0.566	0.38

Local Interactions:

i_j

Score

Prob

See all coupling residues
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