May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

India-Argentina Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0145] and [D:0192]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 -0.3 -0.3 1.1 -0.1 0.1 0.1 0.1 -0.1 0.4 0.2 0.7 -0.1 -0.4
F 0.7 -0.1 0 0 -0.1 0 0 0.2 0.3 -0.5 0.4 -0.1 -0.5 0.5 0 0.4 -0.1 -1.1 0 0.2
I 0.3 -0.1 0 0 0 0 0 0.2 -0.1 -0.1 0 0.5 -0.1 0.1 0 -0.1 0.5 -0.5 0 -0.4
L 0.7 -0.1 -0.1 -0.1 0.1 -0.1 -0.1 -0.2 -0.3 0.6 -0.1 -0.2 -0.5 0.5 -0.1 0.3 0.8 -1.6 -0.1 0.4
V 0.6 0.3 0 0 -0.1 -0.1 0 0.9 0.1 0 -0.1 0.2 -0.7 -0.7 0 -0.6 -0.6 1 0 -0.3
M -0.3 0.3 0 0 -0.1 0 0 -0.1 0.1 -0.3 0 -0.1 -0.3 -0.1 0 -0.1 1.7 -0.1 0 -0.3
W 0 0 0 0 0 0 0 0 0.5 -0.1 0 0 -0.1 -0.1 0 -0.1 0 -0.4 0 -0.1
Y -0.1 0 0 0 0 0 0 0 -0.1 -0.2 0 0 0.6 0 0 0.1 -0.2 -0.5 0 0.6
D -0.3 -0.1 0 0 0 -0.1 0 -0.1 -1 0.4 0 -0.1 -0.4 -0.1 0 -0.3 -0.2 2.1 0 -0.2
E -0.3 -0.1 0 0 -0.1 -0.1 0 -0.1 -1.1 1.4 -0.1 -0.2 -0.1 -0.3 0 -0.3 -0.2 1.9 0 0.1
K -0.1 0 0 0 0 0 0 0 0.1 -0.1 0 0 -0.2 0 0 0.1 0 0 0 0
R -0.2 0 0 0 0 0 0 0.4 0 -0.2 0 0 -0.1 -0.1 0 0.1 -0.1 0.5 0 -0.1
H -0.1 0 0 0 0 0 0 0 0.6 -0.1 0 0 0.4 -0.1 0 -0.2 -0.1 -0.6 0 -0.1
N -0.1 0 0 0 0 0 0 0 0.6 -0.2 0 0 -0.3 -0.1 0 0.2 -0.1 0.1 0 -0.1
Q -0.3 0 0 0 0 0 0 0 -0.1 -0.5 0 0 0.5 0 0 0.1 -0.2 0.8 0 -0.3
S -0.6 -0.1 0 0 0.1 0.3 0 0.2 0.6 0.3 -0.2 0.4 -0.8 0.2 0 -0.3 0 0.5 0 0.2
T 0.7 0.1 -0.1 -0.1 0.4 0.1 -0.1 -0.5 1 -1.2 0.2 -0.2 -1.1 0.7 -0.1 1 -0.3 0.3 -0.1 0.3
G 0.3 -0.1 0 0 -0.1 -0.1 0 -0.2 0.7 1 -0.1 -0.1 0.9 -0.2 0 -0.5 -0.4 -0.6 0 0.1
P -0.1 0 0 0 0 0 0 0 -0.2 -0.1 0 0 0.3 0 0 -0.1 0 0.1 0 0
C -0.1 -0.1 0 0 -0.1 -0.1 0 -0.2 0.3 -0.5 -0.1 -0.1 0.7 0.4 0 -0.1 -0.4 -0.5 0 0.8

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0145 1.1 0 0.5 0.3 -0.3 0.5 -1 -0.2 -0.9 0.3 -0.5 0.1 -0.6 -0.2 -0.4 1 1.3 0.5 -0.7 0
0192 0.9 -0.7 -1.1 -1.1 -0.6 -0.8 -1.1 -0.1 2.7 1.1 -0.7 -0.1 0.9 -0.1 -1.1 0.9 0.4 2.2 -1.1 0.6
Select residue pair below:
i_j Score Prob
0145_0192 1.277 0.99
0184_0192 0.872 0.83
0121_0192 0.708 0.62
Local Interactions:
i_j Score Prob
0192_0193 0.706 0.62
0191_0192 0.676 0.57
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...

Page generated in 0.0139 seconds.