OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [A:0143] and [W:0168]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0.3	0.1	-0.1	0.3	-0.1	0.4	-0.3	0.1	0.1	0.3	0.3	-0.1	-0.2	-0.4	0.1	0.2	-0.2	0.4	-0.4
F	-0.2	-0.1	-0.2	-0.3	-0.3	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.6	-0.1	0	-0.1	-0.2	-0.1	0.5	0.1	0
I	-0.2	0.1	0.8	0.1	-0.3	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.1	-0.1	0	-0.1	-0.2	0.1	-0.1	0.1	0
L	0.2	-0.3	0.1	0.2	-0.1	-0.1	-0.2	0.2	-0.1	-0.2	-0.1	0.8	-0.1	-0.1	-0.1	0.4	-0.9	0.7	-0.1	-0.1
V	0.2	0.3	-0.5	-0.5	0.3	0.2	0.3	-0.2	0.2	-0.3	-0.1	0	-0.1	-0.1	-0.2	0.2	0.7	0	-0.3	-0.1
M	-0.2	-0.1	-0.2	-0.3	0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.4	-0.1	0	0.4	0.2	-0.2	0.3	-0.2	0
W	-0.1	-0.1	-0.1	-0.2	-0.2	0	-0.1	0	0	-0.1	0	-0.2	0	0	0	-0.1	-0.2	-0.1	-0.1	0
Y	0.1	-0.2	0.3	0	-0.3	-0.1	-0.2	0.3	-0.1	-0.2	-0.1	0	-0.1	0	0.1	0.3	-0.1	0.2	-0.3	0
D	-0.4	-0.5	0.1	-0.3	0.1	0.8	0	-0.3	-0.3	-0.2	0.1	-0.4	0.1	-0.1	0	0.7	0.9	-0.5	0.2	-0.1
E	0.1	0.6	0.4	0.2	0.1	-0.1	-0.2	0	-0.4	-0.6	0.6	-0.6	0.1	0.2	0.1	-0.2	0.7	-0.1	0	-0.2
K	-0.4	0.3	-0.1	0.1	0.3	-0.2	-0.2	1.4	-0.2	0.5	-0.3	-0.7	0.6	0.1	0	-0.4	-0.1	-0.4	0.4	-0.3
R	0.4	0.4	0.2	0.3	1.1	0.1	0.3	0.7	-0.1	-0.4	-0.3	0.5	0.2	-0.2	-0.4	-0.8	-0.5	-0.5	-0.1	0.1
H	-0.3	-0.3	-0.4	0	0.1	0	-0.5	-0.3	-0.2	1	-0.1	0.2	-0.1	-0.1	0.2	0.7	0.2	0.1	-0.1	0.5
N	-0.3	0.3	-0.2	-0.2	-0.5	-0.1	0.2	-0.1	0.1	-0.2	-0.1	-0.1	-0.1	-0.1	-0.1	0.3	-0.1	0.6	0.4	-0.1
Q	0.4	-0.1	0.4	-0.1	0.3	-0.2	-0.5	0	0.2	-0.7	-0.3	0.2	0.1	0.2	0.6	0.1	0.1	-0.1	-0.7	0.5
S	-0.3	0	0.1	0.2	0.3	0	0.5	-0.4	0.1	0.1	0.2	-0.1	0.1	-0.1	0.2	-0.4	0.5	-0.4	-0.4	-0.1
T	0.6	-0.1	-0.4	0.3	-0.3	-0.2	-0.1	-0.1	-0.2	0.5	-0.1	0.1	-0.2	-0.1	-0.2	0.2	0.5	0	0.2	-0.1
G	-0.1	-0.1	0.4	0.1	0.5	-0.2	1	-0.2	0.4	0	-0.1	-0.6	-0.2	-0.1	-0.2	-0.4	-0.2	-0.2	-0.3	-0.1
P	0.3	0.3	-0.2	0.4	-0.1	0.1	-0.5	-0.7	0.9	0.7	0.4	-0.3	-0.6	0.3	-0.1	-0.2	-0.4	-0.3	0.7	0
C	-0.1	0	-0.1	0.2	-0.1	0	0	0	0	0	0	-0.1	0	0	0	-0.1	-0.3	0	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0143	1.7	-0.8	-0.9	-0.3	-0.2	-1	-1.4	-0.6	0.5	1.6	0.7	0.5	0.1	-0.3	0.9	0.3	0.1	0	1.4	-1.7
0168	0.4	0.4	0.9	1.1	1	-0.6	-0.1	-0.3	-0.3	-0.2	-0.7	-0.2	-0.9	-1.1	-0.4	0.3	0.8	0.2	0.4	-1

Select residue pair below:

i_j	Score	Prob
0143_0168	1.227	0.98
0146_0168	0.923	0.88
0142_0168	0.565	0.38

Local Interactions:

i_j	Score	Prob
0168_0169	1.155	0.97
0167_0168	0.614	0.46

See all coupling residues
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