OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [A:0143] and [Q:0147]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.4	0.4	-0.4	-0.2	-0.2	-0.3	0	0.5	0.2	-0.2	-0.2	0.2	0.1	0.6	-0.3	-0.1	-0.2	0	0.5	0.2
F	-0.7	-0.1	-0.1	0.1	0.5	0.1	0	-0.1	-0.1	-0.3	-0.5	-0.5	-0.2	-0.2	-0.1	-0.1	0	2.3	-0.2	0
I	0	-0.1	0	-0.2	-0.1	0.2	0	-0.1	-0.4	0.1	0.3	-0.4	0.9	0.2	-0.3	-0.2	0.1	-0.1	-0.1	0
L	-0.1	-0.3	-0.1	1.2	-0.2	0.8	0	-0.1	-0.6	-0.4	0.2	-0.3	0	-0.3	0.1	-0.1	0.4	-0.3	0.1	0
V	0.2	0.2	-0.1	0.3	0.1	-0.1	-0.1	-0.2	0.1	0.3	0	0.3	0.5	-0.1	-0.2	-0.4	-0.5	-0.3	0	0
M	-0.1	-0.1	0	0.1	-0.1	0.6	0	0.3	0	-0.4	-0.3	0.3	-0.1	-0.3	-0.3	0.1	0.1	-0.1	-0.1	0
W	0.4	0.3	-0.1	-0.2	-0.1	0.6	0	-0.1	-0.5	-0.9	0	0	-0.2	-0.2	0.7	-0.3	0.2	0.1	-0.2	0
Y	-0.5	0.1	-0.1	-0.2	0.7	0.2	0	0.3	-0.6	0.1	0	0.2	-0.2	0.8	-0.2	-0.3	-0.3	0.4	-0.2	0
D	0.1	-0.3	0.4	-0.1	0.2	-0.6	-0.1	0	-0.3	0.3	0.8	0.7	-0.1	0.1	0.2	-0.2	0.2	-0.1	-0.6	-0.1
E	0.3	-0.4	0.1	-0.4	0.1	-0.3	-0.3	-0.3	0.2	0	0.5	0.5	0.1	0.2	0.2	0.4	0.1	-0.1	0.8	-0.2
K	-0.5	-0.4	0.4	-0.6	0.3	-0.1	-0.2	-0.1	0.7	0.4	-0.2	-0.1	-0.6	0.9	-0.2	0.2	-0.1	-0.6	0.7	-0.1
R	0.3	-0.2	-0.3	0.8	-0.2	0.5	0.3	-0.1	0.9	0.6	-0.7	0	0.3	0.1	-0.1	-0.6	-0.2	-0.2	-0.4	-0.1
H	0	0.6	-0.2	-0.5	-0.3	-0.2	-0.1	-0.1	0.2	-0.2	0.5	0.3	-0.3	-0.1	0.3	1.1	-0.2	-0.2	-0.3	0
N	0.2	0.2	-0.1	0	-0.2	-0.2	0.4	0.3	0.2	0.2	0.3	-0.4	0	-0.3	-0.5	0.2	0.3	-0.4	-0.3	0
Q	-0.4	0.7	-0.4	0.7	0.2	0.5	-0.1	-0.2	1	0.2	-0.2	0.2	-0.3	0	-0.2	-0.1	0.2	-0.8	-0.7	-0.1
S	-0.1	-0.3	0.1	-0.2	0.2	-0.4	-0.1	0.1	0.2	0	0.2	-0.3	0.7	-0.6	-0.1	0.7	-0.6	0.5	0.5	-0.1
T	-0.2	0.1	0.5	0.3	-0.3	-0.3	-0.1	-0.2	0.1	0.2	-0.1	0	0.2	-0.3	0.5	0	-0.2	-0.3	0.3	0
G	0.7	-0.2	-0.1	0.3	-0.2	-0.3	0	-0.1	-0.5	0.4	-0.5	-0.5	-0.2	0.5	0.2	0.4	0.7	0.2	-0.4	-0.1
P	0.6	-0.5	0.2	-0.8	-0.6	-0.2	-0.2	-0.4	-0.2	0.2	0.6	0.5	-0.4	-0.6	0.6	-0.2	0.2	-0.1	0.4	-0.1
C	-0.2	0	0	-0.1	0	0	0	0.5	-0.2	0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0143	1.7	-0.8	-0.9	-0.3	-0.2	-1	-1.4	-0.6	0.5	1.6	0.7	0.5	0.1	-0.3	0.9	0.3	0.1	0	1.4	-1.7
0147	1.4	-0.8	-1	0.3	-0.4	0	-1.7	-0.8	1.2	1.7	0.7	0.8	0.1	0	0.8	0.6	0.6	0	-0.2	-1.9

Select residue pair below:

i_j	Score	Prob
0144_0147	1.481	1.00
0143_0147	0.926	0.88
0147_0150	0.789	0.74

Local Interactions:

i_j

Score

Prob

See all coupling residues
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