May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [H:0133] and [I:0137]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 -0.2 0 0 0.6 -0.2 -0.2 -0.2 -0.4 -0.3 0.2 -0.2 0.1 -0.1 -0.5 0.1 0.2 -0.1 0.5 0.3
F -0.8 0 -0.1 0.1 -0.2 -0.1 0 0 -0.1 0.3 -0.1 -0.1 0 0 0.7 -0.2 -0.1 -0.1 0.4 0.2
I -0.2 0 -0.4 0.1 0.3 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.2 0.3 0.2 1 -0.4
L 0.9 0.2 -0.5 0 -0.9 0.1 -0.1 -0.1 0.1 -0.4 -0.4 0.5 -0.2 -0.1 -0.2 0.3 -0.2 0.4 1.6 -0.8
V 0 -0.1 0.3 1 0.8 -0.2 -0.1 -0.1 -0.2 -0.4 -0.2 -0.2 -0.1 -0.1 -0.2 0 -0.4 0.3 0.1 0.8
M -0.1 0 -0.4 0.6 -0.3 -0.1 0 0 -0.1 -0.2 0.3 -0.1 -0.1 0 0 0.1 0.1 -0.2 0.4 -0.4
W -0.4 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0.1 0 -0.1 -0.1
Y -0.4 0 -0.3 0.3 0.6 0 0 0 0 -0.1 0 0 0 0 0 0.3 -0.3 -0.1 0.1 -0.1
D -0.8 0.3 0.3 -0.2 -0.2 0.2 -0.1 -0.1 0.2 -0.1 -0.2 -0.1 0.1 0 0.2 -0.2 -0.3 0.1 0.6 -0.6
E -0.2 0.3 0.5 -0.4 -0.1 -0.4 -0.1 0.8 0.1 0.2 0.1 0.7 -0.1 -0.1 -0.1 -0.4 -0.5 -0.1 -0.4 -0.5
K 0.4 -0.2 -0.3 0.1 0 -0.4 -0.2 -0.1 0.2 0.1 0.7 0.1 -0.2 0.3 0.1 0.1 0.1 -0.6 -0.2 0.5
R 0 -0.2 0.3 0.3 0 0 0.8 -0.1 -0.3 0.9 0.2 -0.3 0.1 -0.1 -0.2 -0.6 0.2 0 -0.6 0.1
H 0.7 -0.1 1.4 -0.1 0 0.3 0 0 -0.1 -0.2 -0.1 -0.1 0 0 -0.1 -0.3 -0.3 0.1 -0.2 -0.5
N -0.5 -0.2 1.1 0.5 -0.3 0.7 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 0 0.1 -0.4 0.7 -0.3 -0.2 -0.4
Q 0.5 0.4 -0.1 -0.4 -0.3 0.3 -0.3 -0.1 0.2 0.1 -0.3 -0.1 -0.2 -0.1 0.7 0.2 -0.2 0.4 -0.8 1
S -0.1 -0.1 -0.4 -0.3 0.2 -0.2 -0.1 -0.1 -0.2 0.7 -0.2 0.1 0.3 0 -0.2 0.3 0.1 -0.3 -0.4 0.3
T 0 -0.1 -0.3 -0.2 0 -0.1 0 0 -0.1 -0.2 -0.1 -0.1 -0.1 0 -0.1 0.5 0.1 0.1 0 0.9
G -0.4 -0.1 -0.1 0.1 0 -0.3 -0.1 -0.1 0.6 0.2 -0.1 0.1 -0.1 0 0 0.4 0.2 0.1 0 -0.7
P 0 -0.1 0.3 -0.3 0.4 0.3 -0.1 -0.1 -0.2 -0.4 0.5 -0.2 -0.1 -0.1 -0.2 -0.2 0.8 -0.3 -0.7 0.3
C 0.7 0 -0.1 -0.3 0.4 0.2 0 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 -0.2 -0.3 -0.2 0.1 0.5
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0133 1.2 -0.8 -0.8 0.3 0.2 -0.4 -1.7 -1.1 0.9 0.8 0.1 0 -0.2 0.1 1.1 0.2 0.1 0.4 0.7 -0.7
0137 1.8 -0.8 1.2 0.5 1.3 -0.5 -1.1 -1.2 -0.5 0 -0.3 -0.4 -0.9 -1.3 -0.4 0.6 1 -0.1 0.8 0.5
Select residue pair below:
i_j Score Prob
0133_0166 1.372 0.99
0133_0139 0.617 0.47
0133_0137 0.559 0.37
Local Interactions:
i_j Score Prob
0133_0134 0.817 0.77
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0129 seconds.