OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [A:0121] and [S:0145]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0.4	-0.1	-0.1	-0.5	0.1	0.1	-0.1	-0.4	-0.1	-0.2	0	0.3	0.3	-0.4	0.2	0.4	-0.1	0.3	0.5
F	-1	-0.8	-0.1	-0.5	0.3	-0.2	-0.3	0.8	-0.3	0.2	-0.2	0.4	0.1	-0.4	1.9	0	1	-0.2	-0.1	0.4
I	0.4	0.7	-0.3	0	0.7	0.4	0	-0.2	-0.6	0.4	0	-0.1	-0.1	-0.1	-0.3	0.2	-0.9	1.1	-0.1	-0.5
L	-0.5	-0.5	-0.4	0.1	-0.1	-0.3	-0.1	-0.3	0	1.1	0.5	-0.2	0.5	0.2	1.2	0.6	0.6	-0.4	-0.1	-0.7
V	0.5	0	-0.5	1.4	-0.4	1.2	-0.1	0.1	0.6	0.2	-0.1	-0.2	-0.1	-0.1	-0.1	-0.7	-0.8	0.6	-0.1	-0.7
M	-0.6	0.3	-0.1	1.3	0.1	-0.2	-0.1	0.6	1.3	0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.3	-1.2	-0.1	0	-0.6
W	-0.5	-0.4	1.2	-0.2	1	-0.2	-0.1	-0.2	-0.3	-0.5	-0.1	-0.2	0.2	0.2	-0.3	-0.1	1.9	-0.5	0	-0.7
Y	0.1	0	0.5	-0.2	0.6	-0.9	-0.2	-0.4	-0.1	-0.7	-0.2	-0.1	0	0.3	-0.6	0.2	0.9	1.1	-0.1	0.5
D	0.4	-0.2	0.2	-0.4	-0.4	-0.2	0	0.4	-0.5	-0.4	-0.1	0.3	-0.1	-0.1	-0.2	1.1	-0.2	-0.4	0	0.6
E	0	0.2	1	-0.3	0.1	-0.2	0	-0.1	-0.5	-0.8	0	-0.1	0	-0.1	-0.1	-0.3	0.2	0	0	0.7
K	-0.4	-0.1	-0.2	-0.4	-0.3	0.7	0	-0.1	0	0.5	0	-0.1	0	0	-0.1	-0.2	-0.4	-0.2	0	-0.2
R	0	-0.1	-0.1	-0.2	0.1	-0.1	0	0	1	0.3	0	0	-0.1	0	-0.1	0.1	-0.3	-0.2	0	-0.2
H	0.8	-0.5	0	-0.9	0.5	-0.3	-0.1	-0.3	-1.1	-0.6	-0.1	0.1	-0.1	-0.2	-0.4	0.8	0.8	0.1	-0.1	1.2
N	0.3	-0.1	-0.1	1.2	-0.3	0.1	0	-0.1	-0.5	-0.4	0	-0.1	0	0	-0.1	-0.3	0	-0.4	0	-0.3
Q	0.7	-0.1	-0.1	-0.1	-0.4	0.9	0	0	-0.8	-0.7	0	-0.1	0	-0.1	-0.1	-0.4	1	-0.3	0	0.4
S	0.5	2	-0.1	-0.5	-0.4	0.3	-0.2	0.1	-0.5	0.4	0.2	0.1	-0.3	-0.3	-0.5	-0.4	0.7	-1.1	0.3	0.5
T	-0.1	-0.1	-0.2	0	-0.5	-0.2	0	-0.1	-0.2	1.2	0	0.6	0	-0.1	0.1	-0.4	-0.4	0.7	0	-0.3
G	0.4	0.2	0.3	0.2	0.2	0	1	0.2	0.6	-0.3	0.4	-0.1	0.1	0.5	0	-0.8	-1.3	-0.8	-0.1	-0.6
P	-0.5	-0.3	-0.4	-0.1	0.6	-0.3	0	-0.1	-0.3	-0.5	-0.1	-0.1	-0.1	-0.1	-0.2	0.9	0.3	0.8	0	-0.2
C	0	-0.6	-0.3	-0.1	-0.7	-0.3	-0.2	-0.2	2.1	0.7	-0.1	-0.1	-0.3	0.1	0.3	0.2	-1.4	0.7	0	0.3

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0121	1.4	0.8	-0.2	0.1	0.8	0	-0.6	0.2	0	-0.8	-0.5	-0.2	0.1	-0.7	-0.8	0.9	-0.5	0.8	1	-0.3
0145	1.1	0	0.5	0.3	-0.3	0.5	-1	-0.2	-0.9	0.3	-0.5	0.1	-0.6	-0.2	-0.4	1	1.3	0.5	-0.7	0

Select residue pair below:

i_j	Score	Prob
0145_0192	1.277	0.99
0141_0145	1.038	0.94
0142_0145	0.793	0.74
0145_0186	0.703	0.61
0121_0145	0.690	0.59
0145_0190	0.605	0.45

Local Interactions:

i_j	Score	Prob
0144_0145	0.552	0.36

See all coupling residues
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