May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

India-Argentina Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [T:0119] and [F:0205]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 -0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
I 0 0.2 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0
L 0 0.8 0.1 -0.2 -0.1 0 0.2 -0.2 0 0 0 0 -0.2 0 0 0 0 0 0 0
V 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
M 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
W 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 -0.7 1.8 0.1 0.1 -0.1 -0.2 -0.2 -0.1 0 0 0 -0.2 -0.1 0 0 0 0 0 -0.1
K 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 0.4 -0.1 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0.5 -0.2 -0.2 -0.1 0 -0.1 0.4 0 0 0 0 -0.2 0 0 0 0 0 0 0
Q 0 0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0.6 -0.1 -0.5 0.8 0 0.7 -0.4 0.8 -0.5 -0.2 -0.1 -0.3 0.3 -0.4 -0.2 0 0.4 0.3 -0.1 -0.2
T -0.2 -0.1 0.2 0.2 0.8 -0.5 0.6 0.2 0.3 -0.1 -0.3 -0.1 0.6 0.3 -0.1 -0.1 -0.7 -0.6 -0.3 0.5
G -0.1 0.5 -0.3 0.5 -0.1 0.1 -0.1 -0.2 0 0 0 0 -0.1 0 0 -0.1 0 0 0 0
P 0 0.4 -0.2 -0.1 -0.1 0 0 0.4 0 0 0 0 0 0 0 0 0 0 0 0
C 0 0.4 -0.1 -0.1 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0119 -0.1 -0.4 0 0.5 -0.2 -0.4 -0.4 -0.4 -0.2 0.1 -0.4 -0.4 0.1 0.1 -0.1 1.5 0.6 0.1 0.4 0.1
0205 0.2 2.8 1.3 1.8 0.9 0.2 -0.2 1.6 -0.6 -0.9 -1 -0.9 0 -0.4 -0.7 -0.5 -0.7 -0.7 -1 0
Select residue pair below:
i_j Score Prob
0077_0205 1.999 1.00
0089_0205 1.523 1.00
0119_0205 0.968 0.91
0058_0205 0.912 0.87
0205_0247 0.652 0.53
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...

Page generated in 0.0188 seconds.