OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [L:0115] and [P:0175]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	0.1	0.2	-0.4	-0.1	-0.7	0.6	0.4	0.7	0	0.2	0.1	0.3	-0.3	0.2	-0.4	-0.4	0.2	0.1	-0.1
F	0.2	0.4	-0.5	0.5	-0.2	0.1	-0.1	0	0	-0.2	-0.1	-0.2	-0.1	-0.2	-0.1	0	0.5	0	0.1	-0.1
I	-0.2	0.5	0	0.3	-0.1	-0.5	0.1	0.1	-0.2	-0.1	-0.1	-0.2	-0.1	0.4	-0.2	0	-0.2	-0.1	0.7	-0.2
L	0.4	-0.7	-0.3	0	-0.3	0.7	0.9	-0.6	-0.4	0.1	-0.1	0.1	0.2	0	0	0.4	0	-0.3	0.1	-0.1
V	0.1	0.2	0.5	0	0.2	-0.3	0.5	0	-0.2	-0.1	0.4	0.4	-0.1	-0.3	0.1	-0.4	-0.2	-0.4	0.4	-0.2
M	-0.3	-0.4	-0.4	0.1	0.5	0.4	0	-0.1	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.1	0.2	0.1	-0.2	-0.1	0.3
W	0.6	-0.6	0.1	0.3	0.1	-0.5	-0.4	-0.2	-0.2	0.2	-0.1	0	-0.2	-0.1	-0.4	0.4	1.1	0.4	-0.2	-0.2
Y	0.2	-0.1	-0.4	0.7	-0.4	0.5	-0.8	-0.2	0.6	0.1	-0.1	-0.1	-0.3	0.7	-0.2	-0.3	-0.1	0.8	-0.3	-0.4
D	-0.4	0.6	0.1	-0.8	0	-0.2	-0.1	1.3	-0.1	0	0	-0.1	-0.1	0.2	-0.1	-0.1	-0.3	0	-0.1	0.1
E	-0.3	0	-0.1	0.2	0.4	0.2	-0.1	-0.1	0	0	0	0.3	0	0	-0.1	-0.1	-0.1	0.4	-0.1	-0.1
K	-0.5	0.2	0.1	0.2	-0.2	0	-0.1	0.1	0.2	0.3	-0.1	-0.2	-0.1	-0.1	-0.2	0.4	-0.3	-0.2	-0.1	0.5
R	0.1	0.1	0.7	-0.2	0.5	0.8	-0.5	0.1	0.1	-0.2	0.1	0.1	-0.2	-0.1	0.7	-0.2	-0.6	-0.3	-0.2	0
H	-0.1	-0.6	-0.2	0.9	0	0	0.2	0	-0.2	-0.1	-0.1	-0.3	-0.2	-0.1	0.4	0.2	0.4	0.1	0	0.1
N	-0.1	0.1	0	-0.1	-0.3	0.2	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0.4	0	0
Q	0.5	0.3	-0.1	-0.5	-0.6	0.3	0.4	-0.2	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.2	-0.2	0.1	-0.2	-0.1	0.4
S	-0.1	0.1	0	0	0.3	-0.4	-0.2	-0.1	-0.1	-0.1	0	0.4	-0.1	-0.1	-0.1	0.1	0	-0.3	0.2	0
T	0.5	-0.1	0.4	-0.4	0.8	-0.6	-0.1	-0.4	0.1	0.1	-0.1	0.2	0.7	-0.3	0.3	0.3	-0.3	-0.4	-0.4	0.2
G	0.1	0.2	0.5	-0.2	0.1	0	-0.1	-0.2	-0.1	-0.1	0	-0.1	-0.1	0.3	0	-0.1	0	-0.2	-0.1	-0.1
P	0	-0.1	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
C	-0.1	0.1	0	-0.2	0	-0.1	-0.1	-0.1	0	0	0	-0.1	0	0	0	-0.1	0.3	0.2	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0115	0.7	0.2	0.3	1	0.6	-0.2	-0.3	0.1	-0.2	0.1	-0.2	0.6	-0.3	-0.6	0.3	0.3	0.7	-0.1	-1.2	-0.8
0175	0.2	0.3	0.5	1.6	0.5	0	-0.2	-0.2	-0.2	-0.7	-0.7	-0.1	-0.7	-0.1	-0.3	0	-0.1	0.1	-0.1	-0.4

Select residue pair below:

i_j	Score	Prob
0087_0175	1.165	0.97
0085_0175	0.772	0.72
0115_0175	0.710	0.62
0081_0175	0.605	0.45
0175_0178	0.569	0.39
0044_0175	0.552	0.36

Local Interactions:

i_j	Score	Prob
0175_0176	0.901	0.86
0174_0175	0.704	0.61
0175_0177	0.666	0.55

See all coupling residues
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