OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [L:0115] and [A:0138]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	-0.1	-0.7	-0.1	-0.1	0	-0.1	-0.2	0.2	0.3	0.2	0.1	-0.6	-0.1	0.1	0	-0.3	0.2	1.1	0.4
F	-0.5	-0.1	0.8	0.5	0.8	0	0.6	0.6	-0.3	-0.6	-0.3	-0.4	1.1	-0.4	-0.8	-0.3	0.4	-0.2	-0.1	-0.2
I	-0.2	0.2	0.8	0.9	-0.4	0.4	-0.1	-0.2	-0.6	-0.3	-0.1	0.5	-0.1	0.1	-0.4	-0.5	0.4	-0.2	-0.6	-0.1
L	-0.1	-0.2	-0.1	0.1	0.5	-0.5	-0.2	0.1	0.3	-0.5	0.2	0.1	-0.1	0	-0.5	0.2	0.2	0.4	0.4	-0.2
V	-0.3	-0.1	0	0.3	0	0.5	-0.1	0.2	-0.4	0	-0.7	-0.4	0.2	-0.1	0.5	0	0.3	-0.2	0.2	0.6
M	-0.3	0	-0.2	0.4	0.4	-0.1	0	0	-0.3	-0.1	0.7	0.1	-0.2	-0.1	-0.4	0.1	0	-0.1	0.1	-0.1
W	0.5	-0.1	-0.3	-0.7	-0.1	0.3	-0.1	-0.1	-0.3	0.6	0.3	0.8	-0.3	0.2	1	-0.7	0	0.1	-0.4	-0.1
Y	0.1	0	0.8	-0.1	0.6	-0.6	-0.3	0.1	-0.3	-0.2	0.8	-0.6	0.3	-0.6	0.6	-0.3	0.6	-0.2	-0.8	0.2
D	-0.2	0.4	-0.3	-0.2	0	-0.1	-0.1	-0.1	0	-0.8	0.5	1.6	-0.1	0.2	0.1	0	-0.1	-0.1	-0.6	-0.1
E	0.2	0	-0.2	-0.1	-0.3	-0.1	0	-0.1	-0.2	-0.3	0.3	1	0.2	-0.2	-0.4	0.3	-0.3	-0.1	0.1	-0.1
K	-0.4	0	-0.4	-0.2	-0.4	-0.1	0	0	1.1	1.3	-0.3	-0.4	0.1	0.1	-0.5	0	-0.3	0.2	0.8	-0.1
R	0.3	-0.1	0.6	-0.3	-0.2	-0.1	-0.1	-0.2	0.3	1	-0.8	0.1	0.4	-0.2	-0.2	-0.1	-0.3	0.6	0.7	-0.2
H	0.9	-0.1	0	-0.3	0.1	0.1	-0.1	-0.1	-0.4	0.5	0.2	-0.2	-0.3	0.5	0.7	0.1	0	-0.5	-0.9	0
N	0.2	0	-0.1	-0.1	-0.1	0	0.5	0	-0.1	-0.1	0.3	-0.4	-0.1	-0.1	0.1	-0.1	-0.1	0	-0.1	0
Q	0	0	-0.3	0.1	-0.3	-0.1	-0.1	-0.1	-0.3	0	0	-0.1	-0.2	0.2	0.2	0.6	-0.5	0.3	0.8	-0.1
S	0.1	0	0	0.1	0.5	-0.1	-0.1	-0.1	1.2	0	0	-0.4	-0.3	0	0.1	0.2	0	-0.1	-0.2	-0.1
T	0.1	-0.1	0.3	-0.4	-0.5	-0.2	-0.1	-0.2	0.5	0.3	-0.1	0.2	-0.3	0.3	0.1	0.2	0	-0.4	-0.5	-0.2
G	0	-0.1	-0.4	0.2	0.1	0.6	-0.1	-0.1	-0.5	-0.6	-0.5	-0.3	0	0.1	-0.1	0.4	-0.1	0.3	1.2	-0.1
P	-0.1	0	0	0	0	0	0	0	0	0.2	-0.1	-0.1	0	0	-0.1	0	-0.1	0	-0.1	0
C	-0.1	0	0.2	-0.1	-0.2	0	0	0	0.2	-0.3	-0.3	-0.3	0.3	-0.1	0.4	-0.1	0.4	0	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0115	0.7	0.2	0.3	1	0.6	-0.2	-0.3	0.1	-0.2	0.1	-0.2	0.6	-0.3	-0.6	0.3	0.3	0.7	-0.1	-1.2	-0.8
0138	0.5	-1.2	0.3	0	0.3	-0.7	-1.2	-0.9	0.1	0.6	0.6	0.9	0	-0.2	0.6	0.1	0.6	-0.5	1.3	-1.1

Select residue pair below:

i_j	Score	Prob
0138_0167	2.311	1.00
0115_0138	1.883	1.00
0138_0166	0.804	0.76
0138_0154	0.609	0.45

Local Interactions:

i_j	Score	Prob
0137_0138	1.431	1.00
0138_0140	0.668	0.55

See all coupling residues
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