OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [V:0113] and [A:0114]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0	-0.1	-0.1	0.3	-0.4	-0.1	-0.1	0	-0.5	0.1	0	0.6	0.2	-0.2	0.2	0.2	0.2	-0.1	0	-0.1
F	0.1	0	-0.3	-0.4	-0.2	0	0	-0.2	-0.3	0.1	0.4	-0.2	-0.2	0.6	0.3	0.2	-0.1	-0.1	0	-0.1
I	0.2	-0.5	-0.6	-0.7	-0.2	-0.5	-0.5	-1.4	0.5	0.4	0.6	0.5	0.1	0.5	0.1	0.7	0.7	0.8	-0.5	-0.2
L	0.7	-0.5	-1	-1.1	-0.8	-0.4	-0.4	-1.1	0.8	-0.1	0.8	0.7	0.2	0.3	0.2	-0.1	0.4	0.2	-0.3	0.8
V	0.2	-0.5	0.1	-0.7	0.5	-0.1	-0.3	-1.8	-0.1	0.3	0.8	0.5	-0.1	0.2	-0.3	0.7	0.9	0.6	-0.2	0
M	-0.1	0	-0.1	-0.2	-0.1	0	0	-0.1	0.3	0.3	0.2	-0.2	-0.1	-0.1	0	-0.1	0.1	-0.1	0	0
W	0	0	0	-0.1	0	0	0	0	0	0	-0.1	-0.1	0	0	0	0	-0.1	0	0	0
Y	0.2	0	-0.2	-0.2	-0.1	0	0	-0.1	0.7	0.2	0.4	-0.3	0.4	-0.1	-0.1	-0.2	-0.3	-0.1	0	0
D	-0.1	0	0.4	0.8	-0.1	0	0	0.4	-0.2	-0.1	-0.2	-0.2	-0.1	-0.1	0	-0.1	-0.2	-0.1	0	0
E	0.1	0.3	0.3	0.9	-0.3	-0.1	-0.1	0.3	-0.1	0.1	-0.4	-0.5	-0.1	-0.1	-0.1	-0.2	0	-0.2	0.4	-0.1
K	-0.3	-0.1	1	0.7	0.3	0.6	-0.1	1.1	-0.5	-0.3	-0.5	-0.4	-0.2	-0.3	-0.1	-0.3	0.1	-0.2	-0.1	-0.1
R	-0.3	0.3	1.1	1	-0.3	-0.1	0	0.3	-0.5	-0.3	-0.4	0.2	-0.2	-0.2	-0.1	-0.2	-0.1	-0.3	-0.1	-0.1
H	-0.1	0.4	-0.3	-0.1	0.5	0.4	0	-0.1	-0.2	-0.1	-0.2	-0.2	0	-0.1	0	-0.1	-0.2	-0.1	0	0
N	-0.1	0	-0.1	0.2	0.7	0	0	0.2	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	0	-0.1	-0.1	0	0	0
Q	-0.1	0.4	-0.2	-0.2	0.3	0	0	0.8	-0.2	-0.1	-0.1	-0.3	-0.1	-0.1	0	-0.1	-0.2	-0.1	0	0
S	-0.1	-0.1	0.8	-0.1	0.7	-0.1	0	0.6	-0.3	-0.1	-0.3	-0.1	-0.1	-0.1	-0.1	-0.2	-0.2	-0.2	0	-0.1
T	0.3	-0.1	0.3	-0.4	-0.3	-0.1	0.4	-0.3	-0.3	0.3	-0.1	-0.1	0.5	-0.1	-0.1	-0.3	-0.1	-0.1	0.7	-0.1
G	-0.2	-0.1	0.1	-0.1	-0.2	0	0	0.6	1.2	-0.2	-0.3	-0.2	-0.1	0.1	-0.1	-0.2	-0.3	-0.1	0	-0.1
P	-0.1	0.1	-0.4	0.5	0.3	0	0.8	0.6	0.5	0.2	-0.2	0.1	-0.3	-0.2	0.1	0.7	-0.5	0.3	-0.3	-0.4
C	0	0	-0.1	0.3	-0.1	0	0	-0.1	-0.1	0	-0.1	-0.1	0	0	0	0	-0.1	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0113	0.2	0.1	1.8	1.5	1.8	-0.6	-1.2	-0.4	-0.4	0.1	0.2	-0.4	-0.8	-0.6	-0.7	-0.5	-0.2	-0.4	2.1	-1
0114	0.5	-0.8	0.7	0.5	0	-0.8	-0.7	-0.1	1.2	0.6	0.6	0.7	-0.6	0.1	-0.4	0.4	0.6	0	-1.1	-1.2

Select residue pair below:

i_j	Score	Prob
0106_0113	0.740	0.67
0079_0113	0.667	0.55
0102_0113	0.566	0.38

Local Interactions:

i_j	Score	Prob
0112_0113	1.475	1.00
0111_0113	0.635	0.50
0113_0114	0.596	0.43

See all coupling residues
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