OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [K:0106] and [V:0113]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.5	-0.3	0.1	0.8	0.5	-0.2	-0.1	-0.1	0.1	0.1	0.2	-0.1	-0.1	0.2	-0.3	-0.3	0.5	0.1	0.3	-0.1
F	-0.3	-0.1	0.7	-0.2	0.5	-0.2	0	-0.1	-0.1	0.3	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.2	-0.1	0	0
I	-0.1	0.3	-0.2	0	-0.7	-0.1	0	0	-0.1	-0.1	-0.1	0	0	-0.1	0	0	-0.1	-0.1	0.8	0
L	-0.1	0	0.1	0.8	-0.3	-0.2	0	-0.1	-0.1	0.1	-0.3	-0.1	-0.1	0.1	-0.1	-0.2	-0.3	0.2	0.2	0
V	-0.2	-0.1	0	0.1	-0.8	0	0	-0.1	-0.1	-0.1	0.2	0	0	0.4	-0.1	-0.1	-0.1	-0.1	0.4	0
M	-0.1	-0.1	-0.1	-0.1	-0.6	0	0	-0.1	0	-0.1	-0.1	-0.1	0	0	0	0	0.7	0	0.4	0
W	-0.1	0	-0.6	0.8	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.2	0
Y	0	0	0.1	-0.3	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
D	0.4	0.1	0.1	-0.1	0.1	-0.1	0	0	-0.1	0.3	-0.4	1.1	-0.1	-0.1	-0.1	-0.2	0.4	0.5	-1	-0.1
E	0.1	-0.6	-0.3	0.4	0.2	-0.3	-0.1	0.5	0.2	0.3	0.3	-0.4	0.2	0	0.4	0.6	0	0.6	-0.4	-0.1
K	0.1	0.3	0.2	0.2	0.3	0.5	-0.1	0.3	0.1	-0.1	0	-0.3	-0.1	0	-0.2	0.1	-0.3	-0.3	-0.1	0.3
R	0	0.2	0.8	0.3	0.7	-0.2	-0.1	-0.2	-0.3	-0.1	-0.1	0.2	0.4	-0.2	0.1	0	-0.5	-0.5	0.4	-0.2
H	-0.1	-0.1	0.1	-0.6	0.4	0.4	0	-0.1	0	-0.1	0.6	-0.2	0	0	0	-0.1	-0.1	-0.1	-0.2	0
N	0.2	0.3	0.3	0.2	-0.7	-0.1	0	0.1	-0.1	0	-0.2	-0.2	0	-0.1	0.4	-0.1	-0.1	0.3	0.1	0
Q	-0.3	0.2	0.4	-0.2	0.5	-0.1	0	-0.1	-0.1	-0.2	0.3	0.6	-0.1	-0.1	-0.1	-0.1	0.2	-0.2	-0.1	-0.1
S	-0.1	-0.2	0.1	-0.1	0.5	-0.1	0	-0.1	0.4	-0.3	-0.2	0	-0.1	-0.1	-0.1	0.4	0.3	-0.2	0.3	0
T	0.3	-0.2	-0.1	-0.2	-0.4	0.4	0	-0.1	0.1	-0.2	0.2	0	-0.1	-0.1	-0.1	0.1	-0.2	0	0.4	0
G	0.1	-0.2	-0.2	0.3	0.8	-0.1	0	0.1	-0.1	-0.2	0.1	-0.3	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.4	0
P	0.4	0	-0.1	-0.4	-0.1	0	0	0	0	0.3	-0.1	0	0	0	0	0	0	0	-0.3	0
C	-0.1	0	-0.4	-0.3	0.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0106	1.3	-0.8	-0.6	0.6	-0.3	-0.8	-1.1	-1.3	0.7	1.4	1.5	1.5	-0.6	0.2	0.5	0.4	0.1	0.3	-1	-1.5
0113	0.2	0.1	1.8	1.5	1.8	-0.6	-1.2	-0.4	-0.4	0.1	0.2	-0.4	-0.8	-0.6	-0.7	-0.5	-0.2	-0.4	2.1	-1

Select residue pair below:

i_j	Score	Prob
0102_0106	1.327	0.99
0106_0135	0.857	0.82
0106_0110	0.798	0.75
0106_0113	0.740	0.67

Local Interactions:

i_j

Score

Prob

See all coupling residues
Download raw data

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