OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [L:0102] and [A:0135]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.2	0.4	0	-0.3	-0.4	0	-0.1	0.1	0	0	-0.5	0.3	0.3	-0.1	-0.2	-0.1	-0.2	-0.1	0.1	1.2
F	-0.1	-0.2	0.6	0.2	-0.3	-0.2	-0.1	0.2	-0.4	0.2	0	0.5	0.1	-0.2	-0.3	0	0.3	0.1	-0.3	-0.2
I	-0.3	-0.5	-0.1	0.3	-0.2	-0.2	-0.3	0.5	-0.3	0	0.3	0.5	1.1	1.1	0	-0.3	-0.3	-0.3	-0.3	-0.5
L	0.1	0.1	-0.6	-0.1	0	-0.1	-0.2	-0.1	-0.3	0.2	0.5	0.5	0.2	0.3	0.4	-0.2	-0.1	0.3	-0.1	-0.5
V	0.2	0.5	0	-0.2	-0.5	0.2	1.2	1.3	0.3	-1.1	0	0.3	0.2	-0.2	0	-0.7	-0.4	0	-0.2	-0.4
M	0.1	-0.2	-0.1	0.1	-0.5	0.2	-0.1	0.2	0.3	-0.1	0.2	0	0.8	-0.1	-0.1	0.2	0	0	-0.4	-0.2
W	-0.1	-0.5	-0.4	0	-0.5	-0.1	-0.2	-0.8	-0.2	0.4	1.4	1.9	0.5	-0.1	0.4	-0.6	0	0.1	-0.3	-0.3
Y	0.4	0.3	-0.3	0.2	0.2	0.3	0	-0.1	-0.4	0.3	0.2	-0.4	-0.3	0.1	-0.3	0.4	0.1	-0.3	-0.3	-0.2
D	0.2	-0.1	0.7	-0.1	-0.3	-0.1	0	-0.1	-0.3	-0.6	-0.1	0.1	0.3	0.4	0.3	-0.1	-0.2	-0.2	0.4	-0.2
E	-0.4	-0.1	-0.2	0.2	0	0.1	-0.1	-0.2	0.1	-0.2	0.8	1	-0.5	-0.2	0.2	0.1	0.4	-0.1	-0.3	-0.2
K	-0.1	0.4	0.1	-0.6	0.1	-0.4	-0.2	-0.5	0.7	0.3	-0.4	-0.9	-0.3	0	-0.6	0.5	0.7	-0.3	0.9	0.5
R	0.1	-0.6	0.2	0.1	1.4	-0.3	-0.4	-0.7	1.6	-0.1	-1.2	-1.5	-1	-0.3	-0.4	0.4	-0.2	0.2	1.1	1.4
H	-0.6	-0.2	0.1	0.3	0.6	0.1	-0.1	0	-0.6	0.5	-0.7	-0.4	-0.5	0	1.7	0.1	-0.1	-0.4	0.2	-0.3
N	-0.3	-0.1	-0.1	0.2	-0.2	0	0	-0.1	-0.2	-0.3	-0.2	0.2	-0.1	0.3	-0.2	0.3	-0.1	0.3	-0.1	-0.1
Q	0	0.3	-0.3	-0.5	0.5	-0.1	-0.1	0.2	-0.3	0.4	-0.1	-0.3	-0.3	-0.3	-0.5	0.6	0.1	-0.3	0.1	0
S	1.3	-0.1	-0.2	0.3	0.7	0.3	0	0	0.1	-0.6	-0.3	-0.4	-0.3	0.1	0.1	0	-0.1	-0.3	-0.2	-0.2
T	0.2	0.3	0.5	0.1	-0.4	-0.1	-0.1	0	0.4	-0.3	-0.2	-0.5	0	-0.3	0	-0.2	0	0.6	0.1	-0.2
G	0.3	-0.1	0.5	0.4	-0.2	-0.1	0	-0.1	-0.2	0	0.1	-0.2	-0.1	-0.2	-0.2	-0.2	0.4	0.2	-0.2	-0.1
P	-0.3	0	-0.1	-0.1	-0.1	0	0	0	-0.1	0.3	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0
C	-0.2	0	-0.1	-0.1	-0.1	0	0	0	-0.1	0.6	0.3	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0102	0.7	0.1	0.7	1.9	1.1	0.5	-0.3	-0.2	-0.5	0.1	0.4	0.8	-0.5	-0.5	-0.2	-0.4	-0.2	-0.6	-1.1	-1.1
0135	1.5	-0.8	0	0.6	-0.2	-0.9	-1.5	-0.7	-0.2	0.5	0.2	0.5	0	-0.2	0.3	0.1	0.1	-0.4	-0.3	-0.6

Select residue pair below:

i_j	Score	Prob
0102_0106	1.327	0.99
0102_0132	1.178	0.98
0102_0131	1.157	0.97
0102_0135	0.721	0.64
0102_0134	0.611	0.46
0102_0113	0.566	0.38

Local Interactions:

i_j	Score	Prob
0101_0102	0.781	0.73

See all coupling residues
Download raw data

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