OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [L:0102] and [A:0131]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0.1	-0.4	-0.5	0.3	-0.1	0.5	-0.1	-0.2	0.2	0.7	0.3	0.1	-0.4	-0.1	-0.4	0.5	0.2	0	-0.1
F	0.1	-0.2	-0.2	-0.1	-0.4	-0.1	-0.4	-0.4	0	0.3	0.6	0.2	-0.3	0.1	0.3	0.2	-0.3	0.1	0.5	0
I	1	-0.1	-0.2	0.5	-0.7	0.6	-0.1	-0.4	0.2	0.9	-0.3	-0.1	-0.7	-0.8	0.2	0.1	0.1	0.1	0.1	-0.1
L	0.3	0.2	0.4	0.3	0.6	-0.4	-0.4	-0.8	-0.1	0.4	0.1	0.5	-0.4	0	0.2	-0.1	0.8	-0.3	-0.3	0.1
V	0.3	-0.3	0.2	-0.3	0.3	-0.2	0.3	0.1	0.2	0.8	-0.6	0.5	-0.3	-0.2	-0.1	-0.2	0.1	0.4	-0.1	-0.1
M	-0.2	0.7	0.6	0.1	0	-0.1	-0.6	0.4	0.3	0.1	0.1	0	-0.3	-0.1	-0.2	-0.5	0	0	0.3	0
W	-1.1	-0.1	0	-0.4	0.5	-0.1	1.7	0.1	-0.5	-0.7	-0.2	-0.2	0.2	-0.4	0.5	-0.4	0	0.6	0.4	-0.1
Y	-1.1	1	-0.3	0.6	0.2	0	-0.4	0.1	0.1	-0.1	-0.1	0.1	-0.2	-0.3	-0.3	0.1	-0.1	-0.1	0.7	0
D	-0.6	0.3	-0.1	0.6	0	0	-0.2	1.8	0.5	-0.5	-0.1	-0.2	-0.2	-0.2	-0.3	-0.2	-0.2	-0.2	-0.2	0
E	-0.5	-0.2	-0.3	-0.5	-0.5	-0.1	0.7	0.8	0.1	-0.3	0.1	0	1.3	0.5	-0.2	0	0.1	-0.4	-0.4	-0.1
K	0.3	0	-0.5	-0.1	0.4	0.5	-0.2	-1.2	0.2	0.5	0	-0.1	-0.8	1	0.3	0.6	-0.1	-0.1	-0.3	-0.2
R	0.8	-0.8	0.1	0.1	0.3	-0.2	-0.5	-1.3	0	0.7	-0.6	0	-0.4	-0.2	0.8	-0.2	0.6	0.1	-0.3	0.4
H	-0.4	-0.2	0.2	0.2	-0.7	-0.1	-0.2	1.8	0.1	-0.3	0.1	-0.3	-0.1	-0.3	0.3	0.3	-0.4	-0.4	0.2	0
N	0.5	0.2	-0.1	-0.1	-0.1	0	-0.1	-0.3	-0.2	0.1	-0.1	-0.2	-0.1	0.7	0	-0.2	-0.1	-0.1	-0.1	0
Q	0.1	-0.3	0	-0.5	0.2	-0.1	0.3	0.5	-0.1	-0.3	0.1	-0.2	0.4	0.8	-0.4	0	-0.3	0.1	-0.2	-0.1
S	-0.4	-0.1	0.2	0.9	0.1	-0.1	-0.2	-0.2	-0.1	-0.4	0.1	-0.1	0.7	-0.3	0.1	0.5	-0.2	-0.3	-0.2	0
T	0.1	-0.3	-0.1	-0.1	-0.6	-0.1	0.8	0.1	0.5	-0.4	0.6	-0.1	0.7	0.3	-0.5	-0.1	-0.3	-0.2	-0.2	0
G	0.6	0.2	0.3	-0.3	-0.5	0	-0.3	0	-0.3	-0.4	-0.1	0.3	0.1	-0.2	-0.2	0.4	-0.1	0.2	-0.1	0
P	-0.1	-0.1	0	0.2	-0.2	0	-0.1	-0.2	-0.1	-0.2	0	0	0.4	-0.1	-0.1	-0.1	-0.1	-0.1	0.4	0
C	0.5	-0.1	0	-0.2	0.1	0	-0.1	-0.2	-0.2	-0.1	0	-0.1	-0.1	-0.1	-0.1	0.4	-0.1	-0.1	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0102	0.7	0.1	0.7	1.9	1.1	0.5	-0.3	-0.2	-0.5	0.1	0.4	0.8	-0.5	-0.5	-0.2	-0.4	-0.2	-0.6	-1.1	-1.1
0131	0.1	0	-0.7	0.5	-0.8	-0.8	1	0.6	0.9	0.8	0.5	0.5	0.1	-0.5	0.5	0.4	-0.3	-0.1	0	-1.3

Select residue pair below:

i_j	Score	Prob
0098_0131	1.732	1.00
0102_0131	1.157	0.97
0131_0134	0.821	0.78
0099_0131	0.761	0.70
0128_0131	0.704	0.61

Local Interactions:

i_j

Score

Prob

See all coupling residues
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