OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [Q:0100] and [N:0103]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.8	-0.2	-0.3	0.2	0	-0.3	-0.3	-0.3	0.1	0.5	-0.2	0.2	0.1	0	0.4	0	0.5	-0.1	-0.1	0
F	-0.6	0	0	-0.1	0	0	0	0	0.9	-0.1	0	0.1	-0.1	-0.2	0.6	-0.3	-0.2	-0.2	-0.1	0
I	-0.1	0	0	-0.1	-0.1	0	0	0	0.2	-0.2	0.6	-0.2	-0.1	-0.3	-0.2	0	-0.2	0.1	0.5	0
L	-0.1	-0.2	-0.1	-0.3	0.1	-0.1	-0.1	-0.1	0.4	0.7	0.1	-0.3	-0.2	0.3	0.5	0.4	0	0.1	-0.5	-0.1
V	-0.3	-0.1	-0.1	-0.2	-0.1	-0.1	0	-0.1	0.3	0.5	-0.4	-0.2	-0.2	0.2	-0.2	0.2	-0.4	0.5	0.5	-0.1
M	-0.2	0	0	-0.2	-0.1	0	0	0	0.1	0.1	0.3	1.4	0.2	-0.4	-0.3	-0.2	-0.3	-0.3	-0.2	0
W	0.2	0	0	-0.1	-0.1	0	0	0	0.2	-0.7	-0.5	0.3	-0.1	-0.2	-0.1	0.6	0.2	0.3	-0.1	0
Y	-0.6	-0.1	0	-0.1	-0.1	0	0	0	-0.1	0.5	0.5	-0.1	-0.1	0	0	0.1	-0.2	0.1	-0.2	0
D	0.1	0.6	0.2	0.4	0.1	-0.2	-0.1	0.3	-0.1	-0.4	0	0.3	-0.1	0.4	-0.7	0.1	0.4	-0.2	-0.6	-0.2
E	0.3	0.1	0.1	0.4	-0.1	0.1	0.2	-0.1	-0.3	0	0.4	0	0.1	0.1	-0.2	-0.1	0.1	-0.1	-0.1	0.1
K	0.8	0.2	-0.1	-0.5	0.3	-0.2	-0.1	0.2	-0.3	0.1	0.3	-0.8	-0.1	0.1	0.5	0.1	0.3	0.3	-0.4	-0.2
R	0.6	-0.2	-0.2	0.4	-0.4	0.5	0.3	-0.2	0.4	0.4	-0.5	-0.4	-0.4	-0.3	0.5	-0.3	0.2	-0.1	0.1	-0.2
H	0	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	0.4	-0.1	-0.5	-0.1	0.2	0.4	-0.3	0.2	0.2	0.7	-0.1	0	-0.1
N	0.3	-0.1	-0.1	0.1	-0.2	-0.1	-0.1	-0.1	-0.6	-0.2	0	0.6	0.1	0.5	0.1	0.1	-0.2	0.3	-0.4	-0.1
Q	0.7	-0.2	-0.2	0.3	0.1	0.5	-0.1	-0.2	-0.2	-0.2	0.1	-0.6	-0.5	0.3	0.5	0	0.3	0.2	0	-0.2
S	-0.1	-0.1	0.3	0	0.1	-0.1	-0.1	-0.1	0	0.4	-0.1	-0.1	0.8	-0.6	0.5	0.3	0	-0.2	-0.4	-0.1
T	-0.4	-0.1	-0.1	-0.3	0.6	-0.1	-0.1	-0.1	-0.2	-0.4	-0.1	0	0.5	0.6	-0.1	-0.1	-0.2	-0.2	0.9	-0.1
G	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	0	-0.1	0.3	0.7	0.4	0.1	-0.2	-0.3	-0.3	0	-0.4	-0.3	-0.3	0.8
P	-0.3	-0.1	-0.1	0.2	-0.1	-0.1	0	-0.1	0.6	0.3	0.1	-0.3	-0.2	0.5	-0.5	-0.6	-0.5	0.2	0.4	-0.1
C	-0.2	0	0	0	0	0	0	0	-0.1	-0.2	-0.1	-0.1	0	0	-0.1	-0.1	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0100	1.9	-1.4	-0.6	0.5	-0.4	-0.6	-0.8	-1	0.8	1.5	0.9	0.9	0.3	0	1	0.5	0.1	-0.3	-0.3	-2.2
0103	1.5	-1.4	-1.3	-0.7	-0.8	-1.3	-1.5	-1.4	1.8	2	1.3	1.5	-0.3	0.5	1.3	0.9	0.6	0.3	-0.4	-1.3

Select residue pair below:

i_j	Score	Prob
0099_0103	1.595	1.00
0103_0107	1.006	0.93
0100_0103	0.689	0.59
0103_0135	0.557	0.37

Local Interactions:

i_j

Score

Prob

See all coupling residues
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