May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

India-Argentina Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [A:0099] and [N:0103]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.5 -0.3 -0.1 -0.5 0 -0.2 -0.1 -0.1 0.6 0.1 -0.3 0.7 -0.2 -0.4 0.3 -0.1 -0.5 0.4 0.4 0.2
F -0.7 0.2 0 -0.1 -0.1 0 0 0 0.6 -0.2 -0.5 0.4 -0.1 0.5 -0.2 0.2 -0.3 0 -0.1 0
I -0.7 0 0 -0.1 -0.1 0 0 0.4 -0.1 0.1 -0.2 -0.5 0.1 -0.2 0.6 0 0.7 -0.2 -0.1 0
L -0.4 -0.1 -0.1 -0.2 -0.2 -0.1 -0.1 -0.1 0 0.4 0.1 0.8 0.3 0.5 0.1 0.1 -0.5 -0.1 -0.3 -0.1
V 0 -0.1 -0.1 0.3 -0.2 -0.1 0.4 -0.1 -0.5 0.4 0 0 0.5 0.1 0 -0.1 0 -0.4 -0.2 -0.1
M -0.3 0 0 -0.1 0 0 0 0 0.5 0 0.3 -0.3 0 -0.1 0 -0.2 -0.2 0 -0.1 0
W -0.4 0 0 0 0 0 0 0 -0.3 0.5 -0.2 -0.2 0 -0.1 0.5 -0.1 -0.1 -0.1 0 0
Y -0.2 0 0 0 0 0 0 0 -0.3 -0.5 -0.1 -0.3 -0.1 -0.1 0.8 -0.2 0.1 -0.1 -0.1 0.5
D 1 -0.1 -0.1 -0.2 -0.2 -0.1 -0.1 -0.1 0.2 -0.1 0.1 -0.6 -0.2 0 -0.1 -0.5 1 -0.5 0.8 -0.1
E 0.4 -0.1 -0.3 0.8 0.4 -0.1 -0.2 0 -0.8 -0.7 0.2 0.6 0.5 0.4 -0.1 0.2 0.1 -0.2 0.1 0
K 0.3 0.1 0.2 0.2 -0.4 -0.2 -0.2 -0.2 0.8 0.4 -0.1 -0.3 -0.3 0.2 -0.1 -0.1 -0.1 0.4 -0.3 0.2
R 0.5 -0.3 0.1 0.4 0 0 0.1 -0.3 0.1 0.4 -0.7 0.1 -0.3 0.1 -0.1 0.3 -0.4 0.6 0.7 -0.4
H 0 0 0 -0.1 -0.1 0 0 0 -0.5 -0.2 0.3 0.7 0.3 0.3 -0.5 0.3 -0.3 -0.2 -0.1 0
N -0.3 0.7 0.3 0.2 0.3 -0.1 0 -0.1 0.2 -0.6 0.4 -0.7 0.7 -0.2 -0.3 0.2 -0.5 0.2 -0.3 -0.1
Q 0.3 -0.2 -0.1 -0.4 0.1 -0.1 -0.1 -0.2 1 0.3 0 0.4 -0.3 0.3 0 0 0.3 -0.2 -0.2 -0.2
S 0.2 -0.1 -0.1 0.2 -0.1 -0.1 0 -0.1 -0.4 0.2 0 0.3 -0.1 -0.1 -0.2 0.3 0.2 0.2 -0.2 -0.1
T -0.1 -0.1 -0.2 -0.2 -0.1 -0.1 -0.1 -0.1 0.1 0.1 0.3 -0.5 0 0.1 0.3 0.1 0.7 0.2 -0.1 -0.1
G 0.4 -0.1 0 -0.1 0.2 -0.1 0 0 -0.3 0.2 0.5 -0.1 -0.2 -0.4 0.1 -0.2 -0.4 0.2 0.5 -0.1
P 0.5 -0.1 -0.1 -0.3 -0.2 0.2 -0.1 0 -0.1 0.6 0.4 0.1 -0.3 -0.2 -0.2 0 0.4 0.1 -0.5 0
C -0.2 0 0 0 0 0 0 0 0.6 -0.3 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0099 0.9 -0.8 -0.7 0 -0.1 -1 -1.4 -1.2 0.3 1.6 0.9 1.5 -0.4 0 0.9 0.2 0.3 -0.1 0.2 -1.5
0103 1.5 -1.4 -1.3 -0.7 -0.8 -1.3 -1.5 -1.4 1.8 2 1.3 1.5 -0.3 0.5 1.3 0.9 0.6 0.3 -0.4 -1.3
Select residue pair below:
i_j Score Prob
0099_0103 1.595 1.00
0095_0099 1.389 0.99
0099_0131 0.761 0.70
0053_0099 0.721 0.64
0099_0134 0.585 0.41
Local Interactions:
i_j Score Prob
0099_0100 0.569 0.39
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...

Page generated in 0.0096 seconds.