May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

India-Argentina Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [W:0093] and [T:0094]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.3 -0.2 -0.1 -0.3 0.2 -0.1 -0.1 -0.1 -0.3 -0.7 -0.8 -0.6 0.4 -0.3 1.2 1.9 0.8 0.3 -0.2
F -0.3 -0.4 -0.1 0.7 0.3 0.8 -0.2 -0.2 1 0.7 -0.6 0.3 0.6 -1.5 0.7 -2 -0.7 -0.2 0.8 -0.3
I 0.8 -0.3 0.2 -0.5 -0.3 -0.3 -0.1 -0.4 0.1 -0.4 0.6 0 -0.4 -0.1 0 0.2 -0.2 0.3 -0.5 -0.2
L 0 0 0.3 -0.1 0.6 -0.4 -0.2 -0.1 -0.2 -0.4 0.1 0.4 0.9 0.7 -0.4 -0.7 -1.1 1.1 -0.1 -0.1
V 1.1 0 -0.1 0 -0.2 -0.2 -0.2 0 -0.4 0.9 0.7 -0.2 -0.7 0 -0.2 0.6 -0.4 -0.2 0.3 -0.1
M -0.4 0.1 -0.1 -0.3 -0.2 0.3 -0.1 0.6 -0.7 -0.3 0.2 1.1 -0.6 -0.5 -0.2 -0.2 -0.3 1.2 0.6 -0.2
W -0.6 -0.3 -0.1 -0.3 -0.2 -0.1 -0.1 -0.3 1.8 -0.2 0 -0.9 -0.7 0.6 0.3 0.1 0.8 0.4 0.7 -0.1
Y -0.4 0.1 -0.1 -0.3 0.1 -0.2 -0.1 -0.4 1.2 0.7 0.3 -0.3 1.8 -1.1 0.1 -1.2 -0.2 -0.5 -0.7 0.2
D -0.5 0.3 0.4 0.1 -0.2 -0.1 0 -0.1 -0.3 -0.1 0.2 -0.1 -0.2 0.8 0.3 0.3 -0.3 -0.6 -0.3 0.4
E -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.2 -0.1 -0.1 0.2 -0.2 -0.5 -0.1 0.5 0 -0.4 0.4 0
K -0.2 -0.1 0 -0.1 -0.1 0 0 0.4 -0.2 -0.1 -0.1 -0.1 0.3 0.1 0 -0.3 -0.3 -0.3 0.7 0
R 0 1.1 -0.1 -0.2 -0.1 -0.1 1.4 1 -0.3 -0.2 -0.4 -0.4 1.4 -0.5 -0.1 -1.1 -0.3 -0.8 -0.5 -0.1
H -0.3 0.3 0 -0.1 0.4 0 0 -0.1 -0.3 -0.1 -0.2 0.5 0.7 -0.4 -0.1 -0.1 0.2 -0.4 -0.2 0
N 0.4 0.2 -0.1 0.2 -0.1 -0.1 -0.1 0.2 -0.8 0.5 -0.2 -0.2 -0.4 -0.6 -0.1 1.2 0.3 0 -0.4 -0.1
Q -0.2 -0.1 0 -0.1 0 0 0 -0.1 -0.3 -0.1 -0.1 0.8 -0.1 0.3 0 0.2 0 -0.4 -0.1 0
S 0.5 -0.3 -0.2 0.5 -0.3 0.4 -0.1 -0.3 -0.6 -0.3 0.3 0.1 -0.3 -0.8 0.3 0.6 1 -0.2 0.4 0.4
T 0.2 -0.3 -0.1 0.1 0.5 -0.1 -0.2 0 0.7 -0.3 0.4 -0.2 -0.4 0.8 -0.2 0 0.9 -0.6 -0.5 -0.1
G -0.2 0 -0.2 -0.4 -0.1 -0.1 -0.1 0.4 0.8 0.2 -0.5 -0.4 -0.8 0.5 -0.3 1.9 0.6 -0.7 0 0.2
P 0.8 0 0.2 1.2 0 -0.3 -0.1 -0.4 -1.1 -0.3 0.4 0.9 -0.3 -0.6 0.1 0.7 0.2 -0.1 -0.1 -0.2
C -0.2 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 0.9 -0.1 -0.3 -0.3 -0.2 1.2 -0.1 -0.9 -0.7 1.9 -0.3 -0.1

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0093 0.6 1.3 0.8 0.9 0.2 0.2 0.5 0.6 -0.4 -0.4 -1.1 -0.1 -1 -0.3 -1 0.4 0.2 0.1 0.1 -0.9
0094 0.7 -0.6 -1.1 -0.2 -0.8 -1 -1.3 -0.5 1 -0.5 0 0.2 -0.3 1 -0.5 2 1.2 1.4 0.3 -1.1
Select residue pair below:
i_j Score Prob
0093_0097 0.703 0.61
Local Interactions:
i_j Score Prob
0093_0094 0.997 0.92
0092_0093 0.600 0.44
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...

Page generated in 0.0196 seconds.