May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

India-Argentina Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [A:0092] and [Q:0097]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.3 -0.2 -0.2 -0.5 -0.3 -0.6 0.3 0.5 -0.1 -0.1 -0.2 1.5 0.7 0.1 0.6 -0.3 -0.5 -0.2 0.2 -0.1
F 0.5 0.5 -0.1 0.3 -0.2 -0.3 -0.1 0.6 -0.3 -0.3 0.3 -0.2 0.4 -0.2 0 0.3 -0.3 -0.3 -0.2 -0.1
I 0 0.7 -0.1 -0.3 -0.1 -0.1 -0.1 -0.2 -0.4 0.3 0.3 0.3 -0.3 -0.1 -0.1 -0.2 0.2 -0.1 -0.2 -0.1
L -0.3 -0.3 0.1 1.2 0 0.3 -0.2 0 0.4 0.7 0.2 0 -0.5 -0.3 -0.7 0.2 0.2 -0.8 0.2 0.2
V 0.1 -0.1 0 -0.3 -0.1 -0.2 0.3 -0.1 -0.1 -0.1 0 0.9 0.2 0 -0.3 -0.2 -0.1 -0.1 0 0
M 0.3 -0.1 -0.1 0.8 -0.2 -0.3 -0.1 -0.2 1.2 0 -0.1 -0.4 0.3 -0.2 0.1 -0.4 -0.1 -0.2 -0.1 -0.1
W -0.1 0 0 -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0
Y -0.1 0 0 -0.1 0 0 0 -0.2 -0.1 0 0 -0.1 -0.1 0 0.4 -0.1 -0.1 0 0 0
D -0.3 -0.1 0 -0.5 -0.1 1 0.4 -0.1 -0.1 0.3 0 0.2 -0.1 -0.1 -0.2 -0.2 -0.1 -0.1 0 0
E 0.4 -0.1 0 0.1 0.4 -0.2 0 -0.1 -0.1 -0.1 0 -0.2 -0.1 -0.1 0.3 -0.3 0.1 -0.1 -0.1 -0.1
K -0.2 -0.1 0 0.1 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 0 -0.2 -0.1 0.8 -0.1 0 -0.1 -0.1 -0.1 0
R 0.3 -0.1 -0.1 0.3 -0.2 0.1 -0.1 -0.3 0 0.1 -0.1 -0.7 -0.2 -0.1 1.1 -0.2 -0.2 0.2 0 0
H 0.7 -0.2 -0.1 -0.8 0.4 -0.2 -0.1 -0.3 -0.4 -0.4 -0.1 -0.5 1.5 0.2 -0.3 0.5 0.2 0.4 -0.1 -0.1
N -0.1 0 0 -0.1 0 0 0 0 -0.1 0 0 0.3 -0.1 0 -0.1 -0.1 -0.1 0 0 0
Q 0.1 0.3 0 1.1 -0.1 1.3 -0.3 0.4 0.1 -0.2 -0.2 -1.4 0.2 -0.3 -0.4 -0.3 0.4 0 0.1 -0.4
S 0.6 0.1 0.1 -0.1 -0.4 -0.2 -0.1 -0.4 0.3 -0.3 -0.2 0 -0.2 -0.2 -0.1 0.6 0.3 0.2 -0.3 0.7
T 0.6 -0.1 -0.1 0 -0.2 1 -0.1 -0.2 -0.5 -0.1 -0.1 0.4 -0.3 -0.2 -0.6 0.3 1.1 -0.3 -0.2 -0.1
G -0.8 0.3 0.5 -0.5 0.4 -0.5 -0.5 0.3 -0.1 0.5 -0.1 -0.8 0.1 0.3 0.5 0 0 0.5 0.5 0.1
P -0.3 -0.6 0.2 0.5 0.1 -0.3 -0.3 0.2 0.9 -0.7 0.1 -0.5 -0.9 0.2 0.4 0.3 -0.1 0.6 -0.3 -0.4
C -0.2 0.2 -0.2 -0.5 0.6 -0.5 -0.1 -0.3 0 0.9 -0.1 1.5 -0.4 -0.1 -0.3 0.1 -0.4 -0.2 0.2 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0092 -0.2 0.2 -0.4 1.1 -0.4 0.1 -1.2 -1 -0.3 -0.8 -0.4 -0.1 -0.1 -1 0.3 0.6 0.3 3 0.3 0.7
0097 1.4 0 -0.8 1.2 -0.3 0.2 -0.9 -0.7 0.7 0.4 -0.7 0.6 0.3 -0.9 0.3 0.5 0.9 -0.1 -0.8 -1.1
Select residue pair below:
i_j Score Prob
0076_0092 1.164 0.97
0092_0101 0.622 0.47
0092_0127 0.609 0.45
0092_0097 0.574 0.39
Local Interactions:
i_j Score Prob
0092_0093 0.600 0.44
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...

Page generated in 0.0168 seconds.