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Coupling matrix for [V:0088] and [L:0132]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0.8 0.1 0.1 0 -0.3 -0.3 0.3 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1
F 0 -0.3 -0.1 0.9 -0.2 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
I -0.3 0.2 0 0.3 0.1 0.3 0.1 0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 0.5
L 0.5 -0.1 0.3 0.3 0.7 0.1 0.8 -0.7 0.2 -0.2 -0.2 -0.2 0 0.4 0.1 -0.2 -0.2 -0.2 -0.2 -0.1
V 0.3 0.8 0.1 0.4 -0.8 0.5 0.8 0.6 -0.3 -0.1 -0.1 -0.1 -0.1 -0.3 -0.2 -0.1 -0.1 -0.1 -0.1 -0.4
M 0.1 0 0.3 0.2 0.5 0 -0.1 0.3 -0.1 0 0 0 -0.1 -0.1 0.1 0 0 0 0 -0.1
W 0 -0.5 -0.1 0.3 0.6 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 -0.2 0 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 -0.2 0 -0.2 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.2 0 0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 0.6 -0.1 -0.3 -0.1 0 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0 0.1 0.4 -0.3 0.2 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0
T 0 -0.1 0.3 -0.3 -0.1 0 -0.1 0.3 0 0 0 0 0 0 0 0 0 0 0 0
G 0 0.1 0 -0.2 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 1.2 -0.1 -0.4 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 -0.1 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0088 0.7 -0.2 1.7 2.3 1.5 1.5 -0.3 -0.6 -0.7 -0.7 -0.7 -0.5 -0.6 -0.7 -0.4 -0.2 -0.1 -0.6 -0.7 0.1
0132 0.1 2.1 1.2 2.7 0.7 0.7 1.1 1.3 -0.6 -0.8 -0.8 -0.8 -0.7 -0.6 -0.6 -0.8 -0.8 -0.8 -0.8 -0.6
Select residue pair below:
i_j Score Prob
0079_0088 0.874 0.84
0088_0101 0.806 0.76
0088_0116 0.753 0.69
0088_0132 0.741 0.67
0078_0088 0.696 0.60
0076_0088 0.602 0.44
0088_0105 0.567 0.38
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
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