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Coupling matrix for [V:0088] and [A:0116]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 -0.1 -0.5 0.9 0.1 -0.1 0 0 0 0 0 0 0 0 0.4 0 -0.1 0 0 -0.1
F -0.4 0 0 0 0.2 0 0 0 0 0.5 0 0 0 0 0 -0.1 -0.1 0 0 0
I 0.2 -0.2 1 -0.7 0.8 -0.1 -0.1 0.7 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.2 1 -0.5 -0.1 -0.1 -0.5
L 0.7 0.6 0.8 0.2 0.7 0.4 -0.2 -0.4 -0.2 -0.5 -0.2 -0.2 -0.1 -0.2 -0.5 -0.2 -0.2 0.1 -0.2 0.7
V 0.3 0.4 0.3 0.2 0.9 0.2 -0.1 -0.3 -0.1 -0.3 -0.1 -0.1 0.1 0.2 0.3 -0.6 0.1 -0.1 -0.1 -0.7
M 0.3 -0.4 0.4 0.4 -0.1 -0.3 0 -0.1 0 0.3 0 0 -0.1 -0.1 -0.1 -0.3 0.3 -0.1 0 0.7
W -0.1 0 0.1 -0.5 0.4 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y -0.1 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0.3 0 0 0
D 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R -0.1 0 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0.4 0 0 0
H -0.1 0 -0.2 0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 0 0 0.3 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0 -0.4 0.7 0 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
T -0.1 0 -0.1 0.1 0.2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G -0.1 0 0.2 -0.1 -0.3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0.1 0 -0.2 0.4 -0.5 0.4 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0088 0.7 -0.2 1.7 2.3 1.5 1.5 -0.3 -0.6 -0.7 -0.7 -0.7 -0.5 -0.6 -0.7 -0.4 -0.2 -0.1 -0.6 -0.7 0.1
0116 0.9 0.2 1.8 2.1 1.9 0.8 -0.8 -0.4 -0.8 -0.5 -0.8 -0.8 -0.5 -0.6 -0.4 -0.6 0.2 -0.4 -0.8 -0.1
Select residue pair below:
i_j Score Prob
0091_0116 2.823 1.00
0116_0132 1.279 0.99
0116_0129 1.150 0.97
0116_0137 0.842 0.80
0116_0139 0.777 0.72
0088_0116 0.753 0.69
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
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