May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0087] and [P:0175]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.7 -0.8 0.6 1.2 0.4 -0.2 -0.3 -0.4 -0.2 -0.1 -0.1 -0.2 0.3 0.2 -0.2 -0.2 0 -0.1 -0.1 -0.1
F -0.2 0.3 0.3 -0.7 0.2 0.2 0.2 0.3 0.4 0.7 0.2 -0.2 -0.1 0.4 0.4 -0.3 -0.3 -0.3 -0.3 -0.2
I 0.5 -0.5 0.4 -0.1 0.4 -0.2 -0.1 -0.3 -0.1 -0.1 -0.1 0.4 0.1 -0.1 0.4 0.3 -0.3 0.2 -0.2 -0.2
L -0.1 0.4 -0.2 0.2 0.3 -0.2 0.6 0.5 -0.5 -0.5 -0.3 0 0.3 -0.4 0.2 -0.5 0.7 0.8 -0.1 0.1
V 0.5 -0.4 -0.1 -0.3 0.6 -0.7 -0.6 0 0.3 0 -0.2 0.4 -0.7 0.4 -0.3 0.3 0.4 0.3 0.2 0.3
M 0.1 0.6 -0.2 0.3 -0.2 0.7 0.6 -0.2 -0.2 -0.1 0 -0.1 0 -0.1 -0.1 -0.2 0.3 -0.3 -0.2 -0.1
W -0.2 -0.3 -0.3 0.1 -0.2 -0.1 -0.1 -0.1 0.4 0 0 0 0 0 0 0 -0.1 0.4 0 0.4
Y 0.4 1.6 -0.4 0.9 -0.5 -0.2 -0.2 0.3 -0.2 -0.1 -0.1 -0.1 -0.1 -0.2 0.2 -0.2 -0.3 -0.3 0.3 -0.1
D 0 -0.1 -0.1 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 0.5 -0.2 -0.2 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 -0.1 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S -0.1 0 0.2 0.3 0.2 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 -0.1 -0.1 -0.1 0 0
T 0.1 -0.9 0.1 -0.1 -0.5 1 0.2 0 0.2 -0.1 0.3 -0.3 -0.1 -0.2 -0.5 1 0 -0.3 0.1 0
G 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 0.1 0.4 -0.1 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 -0.1 -0.1 -0.1 0.4 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0087 -0.7 1.4 1.2 1.9 1.6 1 -0.2 0.6 -0.7 -0.8 -0.7 -0.8 -0.7 -0.8 -0.8 0.1 1.1 -0.8 -0.8 -0.1
0175 0.2 0.3 0.5 1.6 0.5 0 -0.2 -0.2 -0.2 -0.7 -0.7 -0.1 -0.7 -0.1 -0.3 0 -0.1 0.1 -0.1 -0.4
Select residue pair below:
i_j Score Prob
0087_0180 2.120 1.00
0087_0117 1.498 1.00
0087_0175 1.165 0.97
0087_0115 1.108 0.96
0079_0087 0.758 0.70
0087_0176 0.570 0.39
0081_0087 0.546 0.35
Local Interactions:
i_j Score Prob
0085_0087 0.732 0.66
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0093 seconds.