OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [V:0086] and [I:0105]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.6	-0.4	0.2	0.5	0.3	-0.6	0.1	-0.4	0.2	0	0.1	-0.2	-0.1	0.1	0.2	0	1	0	-0.2	-0.1
F	-0.5	-0.3	0.4	0	-0.3	0.2	0	-0.1	0	-0.1	-0.1	0	0	0	-0.1	-0.1	0.6	-0.1	0.3	0
I	-0.3	0.4	1.1	0.6	-0.4	0.1	-0.1	-0.2	-0.1	-0.1	-0.2	-0.1	0	-0.1	-0.2	0	-0.1	-0.1	-0.1	0
L	0.1	-0.4	0.6	0.6	-0.4	0.6	-0.1	-0.4	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1	-0.3	-0.1	0.8	0.2	-0.1	-0.1
V	-0.1	-0.1	1.4	-0.2	0.3	-0.4	-0.1	0.1	-0.1	-0.2	0	-0.2	-0.1	-0.1	0.4	0.1	-0.8	-0.2	-0.2	0.3
M	0.3	-0.1	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
W	0.7	-0.5	-0.1	-0.3	0.4	-0.1	0.4	-0.3	-0.2	0.4	0.4	0.6	0.2	-0.1	0.1	-0.1	-0.5	-0.2	-0.2	-0.1
Y	-0.1	-0.3	0.3	-0.2	-0.5	0.6	0	-0.1	-0.1	0.3	-0.1	0	0	0	0.4	-0.2	0.1	-0.1	0	0
D	0	0.9	-0.4	-0.2	-0.1	-0.3	-0.1	-0.2	0.6	-0.2	0.2	-0.1	-0.1	0	-0.1	-0.1	-0.2	-0.1	0.8	0
E	0	-0.1	-0.4	-0.4	0.7	-0.1	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
K	0.2	0.1	-0.4	1	-0.9	-0.1	0	-0.1	0	0	-0.1	0	0	0	-0.1	0	0.3	0	0	0
R	-0.1	0.5	-0.8	-0.5	0.5	-0.5	-0.1	0.8	-0.1	-0.2	-0.2	-0.1	0	0	-0.1	-0.1	0.7	-0.1	-0.1	0
H	0	-0.1	-0.3	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0.2	-0.1	0	0	0
N	-0.6	0	0.8	0.3	-0.2	-0.2	0	-0.2	-0.1	0.2	0.6	-0.1	0	0	-0.1	0.2	-0.4	-0.1	-0.1	0
Q	-0.2	-0.1	0	-0.3	-0.3	0.7	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
S	0.1	0.7	-0.2	-0.1	-0.3	1.1	-0.1	0.4	-0.1	-0.2	-0.2	-0.1	0	-0.1	0.2	0.1	-0.2	-0.2	-0.1	-0.1
T	0.8	0.3	0.1	0.1	0	-0.3	-0.1	0.3	-0.1	0.2	-0.2	-0.2	0	0	-0.2	0.1	-0.1	0.2	-0.1	0
G	-0.3	0.1	-0.8	0.6	0.6	-0.2	0	0.3	0	-0.1	-0.1	0	0	0	-0.1	-0.1	0	0	0	0
P	0.3	-0.5	-0.3	-0.1	0.7	0.1	-0.1	-0.1	-0.1	0.2	-0.2	-0.1	0	-0.1	-0.1	-0.3	-0.7	0.6	-0.1	-0.2
C	-0.2	0.1	-0.5	0.6	0.2	0.2	0	-0.1	0	-0.1	-0.1	0.4	0	0	-0.1	-0.2	-0.2	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0086	1.6	-0.1	0.6	0.7	0.7	-0.8	0	-0.3	0	-0.8	-0.8	-0.4	-1	0.1	-0.8	1.1	1.3	-0.2	-0.4	-0.1
0105	1	1	1.5	2.6	1.4	0.8	-0.8	0.1	-0.7	-0.4	-0.5	-0.6	-0.8	-1	-0.5	-0.3	0	-0.7	-0.6	-0.9

Select residue pair below:

i_j	Score	Prob
0078_0105	1.962	1.00
0086_0105	1.265	0.99
0105_0109	0.787	0.74
0101_0105	0.753	0.69
0105_0108	0.673	0.56
0080_0105	0.654	0.53
0088_0105	0.567	0.38

Local Interactions:

i_j

Score

Prob

See all coupling residues
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