OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [R:0085] and [L:0111]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.3	-0.1	-0.6	0	-0.1	0	0.3	-0.2	0.2	0.1	-0.4	0.5	0.4	0.1	-0.7	-0.1	0.2	0	-0.2	-0.1
F	-0.4	0	-0.2	-0.2	0.2	-0.1	0	0.3	0	0.4	0.9	-0.3	-0.2	-0.2	0.4	-0.4	-0.3	-0.3	0.3	0
I	-0.1	0	-0.1	-0.1	0.3	0	0	0	-0.1	0.4	-0.2	-0.2	0	-0.1	0.3	-0.1	-0.1	0.1	-0.1	0
L	-0.1	0	-0.1	-0.1	-0.1	0	0	0	-0.1	0.4	0.3	0	-0.1	0.1	-0.1	-0.2	-0.1	0.4	-0.1	0
V	0.4	0	-0.1	-0.3	-0.2	-0.1	0	0	-0.1	0.2	-0.4	0.3	0.3	0.3	-0.2	0.3	-0.1	0.1	-0.1	0
M	-0.1	0	0.4	-0.2	0.3	0	0	0	-0.1	0.1	-0.2	-0.2	0	-0.1	-0.1	-0.1	-0.1	0.1	0	0
W	0	0	0	-0.1	0	0	0	0	0	0	-0.1	-0.1	0	0	0	0	0	0	0	0
Y	0	-0.1	0.7	0.1	-0.3	-0.1	0	-0.1	0.1	-0.1	0.7	0	-0.1	0	-0.3	0	-0.4	-0.4	0.4	0
D	0.1	0.2	-0.1	0.3	0.2	-0.2	-0.1	0.1	0.1	-0.2	0.3	0.1	0.4	-0.3	0.1	-0.5	-0.3	0.1	-0.4	-0.1
E	0.6	-0.1	-0.4	0.2	-0.2	-0.3	-0.1	-0.2	0.2	-0.2	-0.5	0.2	0	0.9	-0.5	0.6	0.1	0.1	-0.1	0.7
K	-0.8	0.3	0.1	0	0.2	0.2	-0.1	0.4	0.1	0.4	0.1	-0.7	-0.2	0.3	0.2	0.4	0.1	-0.6	-0.3	0
R	-0.4	0.1	0.7	0.6	0.2	0.1	0.5	-0.2	-0.5	-0.1	-0.4	-0.1	-0.3	-0.6	-0.7	0.2	0.1	-0.1	0.3	-0.1
H	0.3	-0.1	-0.1	0.1	-0.5	-0.1	-0.1	-0.1	0.2	-0.2	0.2	0.1	-0.2	0	0.2	-0.2	0.5	-0.1	0.1	-0.1
N	-0.3	0.1	-0.2	-0.1	-0.2	-0.1	0	0.2	0.2	-0.3	0.5	-0.1	-0.1	0.2	0.1	0.2	-0.2	0.3	-0.1	-0.1
Q	0.5	0.1	0	0.1	0.1	0.2	-0.1	0.1	-0.2	0	-0.6	-0.2	0.1	-0.2	-0.4	-0.2	0.3	-0.2	0.5	0.2
S	0.3	-0.2	0.4	0.7	-0.2	-0.2	-0.1	-0.1	-0.4	-0.6	0.8	0.3	-0.1	0.1	0.3	-0.3	-0.4	0.6	-0.1	-0.1
T	-0.1	-0.1	0.2	-0.2	0.2	-0.2	-0.1	-0.1	0.2	-0.3	0.2	0.6	-0.1	0.1	-0.2	0.8	0	-0.5	0.1	-0.1
G	0.3	-0.3	-0.2	0	-0.4	0.3	-0.3	-0.2	0.2	0.3	0	0.1	0	-0.3	1.2	0.1	-0.2	0.4	-0.1	-0.4
P	0.5	0	-0.1	-0.2	0.2	0	0	0	-0.1	-0.2	-0.3	-0.4	0.4	-0.1	-0.1	-0.1	0.5	-0.1	-0.1	0
C	0.1	-0.1	0.1	-0.3	0.6	-0.1	0	-0.1	-0.2	-0.4	-0.6	0.3	-0.1	0.2	-0.2	-0.2	0.7	-0.3	0.2	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0085	0	-0.5	-0.6	-0.3	-0.3	-0.7	-1.1	0	0.3	0.7	0.4	0.3	0.3	0	0.3	0.4	0.5	1.5	-0.7	-0.6
0111	0.9	-0.9	0.4	-0.6	0.4	-0.5	-0.7	-0.8	0.1	0.2	0.2	0.6	-0.3	0.4	-0.3	0.5	0.2	0.7	0.4	-0.9

Select residue pair below:

i_j	Score	Prob
0085_0114	1.769	1.00
0085_0115	1.289	0.99
0085_0111	0.911	0.87
0085_0175	0.772	0.72
0085_0176	0.543	0.34

Local Interactions:

i_j	Score	Prob
0084_0085	1.029	0.94
0083_0085	0.856	0.82
0085_0087	0.732	0.66
0085_0086	0.597	0.43

See all coupling residues
Download raw data

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