OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [R:0085] and [V:0086]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	-0.2	0	0.1	0.7	0.1	-0.1	0.1	0.3	-0.2	-0.3	0.2	-0.1	0.1	-0.1	0.2	0	-0.3	-0.3	-0.3
F	-0.8	-0.1	-0.1	0.1	-0.2	0	-0.2	-0.1	-0.1	0	-0.1	0.2	0	0.4	0	0.8	0.3	-0.1	-0.2	-0.1
I	-0.1	0	0.1	-0.2	-0.2	0	-0.1	0	0.2	0	0	-0.1	0	0.5	0	-0.1	-0.3	-0.1	-0.2	0.5
L	-0.2	-0.1	-0.4	0.5	-0.4	0	-0.3	0	0.3	0	0	-0.1	0	0.2	0	-0.2	0.1	-0.1	0	0.6
V	-0.1	0.2	-0.3	0.1	0.4	-0.1	-0.2	-0.1	0	0	-0.1	-0.2	0	0.2	0	0.2	0	-0.1	-0.1	0.2
M	-0.3	0	-0.2	-0.1	-0.1	0	-0.1	0	-0.1	0	0	0	0	0.3	0	-0.1	0.2	0	-0.1	0.3
W	-0.1	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
Y	-0.2	-0.2	0	-0.1	-0.3	0	-0.2	-0.2	-0.2	0	0.3	-0.1	0.4	0.7	0	0.3	0	-0.1	0	-0.1
D	0.4	0.4	0.3	0.6	-0.4	-0.1	-0.5	-0.3	-0.3	0.4	-0.1	0.2	-0.1	-0.3	-0.1	-0.5	0.3	0.7	-0.2	-0.2
E	0.7	-0.4	0.3	0.4	-0.1	0.5	-0.5	-0.5	-0.6	-0.4	-0.2	-0.2	-0.1	-0.5	0.2	0	0.2	0.2	1.7	0
K	0.8	-0.2	0.4	0.2	-0.2	-0.1	0.3	-0.2	0.5	-0.1	-0.1	-0.3	-0.1	-0.6	-0.1	-0.2	0.8	-0.2	0.1	-0.5
R	0	0.1	-0.4	-0.3	-0.5	-0.1	-0.6	-0.3	0.6	0.5	-0.1	0.1	-0.1	-0.1	-0.2	0.4	0.1	-0.1	0.6	0.2
H	-0.1	0	0	-0.6	0.1	-0.1	0	0.5	-0.3	-0.1	-0.1	0.1	0	-0.2	0.4	0.4	0.4	-0.2	-0.4	-0.3
N	0.1	0.1	0.3	-0.3	-0.1	0	0.3	-0.1	-0.1	0	0.4	-0.1	0	0.2	-0.1	-0.1	0.2	-0.1	-0.1	-0.2
Q	0.1	-0.2	-0.4	-0.6	0	-0.1	-0.2	0.1	0.8	-0.1	-0.1	-0.3	-0.1	-0.5	-0.1	0.7	0.4	-0.2	1.1	-0.2
S	-0.1	0	0.5	-0.3	0.9	0	0.8	0.4	-0.3	-0.1	-0.2	-0.3	-0.1	-0.4	-0.1	0	-0.8	0.6	-0.7	0.1
T	0.6	0.1	0.6	0.3	0	-0.1	-0.5	-0.2	-0.2	-0.1	-0.1	-0.3	0	-0.1	-0.1	-0.1	-0.4	0.5	-0.3	0
G	-0.6	0.3	0	0.7	0.7	-0.2	1.3	0.4	-0.1	-0.1	0.7	1	0	0.2	0.1	-0.8	-0.6	-0.8	-1.4	-0.5
P	-0.2	0	-0.1	-0.1	0.1	0	-0.1	0	-0.1	0	0	0	0	-0.1	0	-0.1	0.4	0	0.3	-0.1
C	0.5	-0.1	0	0.2	0.2	0	0.3	-0.1	-0.1	0	-0.1	-0.1	0	-0.1	0	0.2	-0.3	-0.1	-0.3	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0085	0	-0.5	-0.6	-0.3	-0.3	-0.7	-1.1	0	0.3	0.7	0.4	0.3	0.3	0	0.3	0.4	0.5	1.5	-0.7	-0.6
0086	1.6	-0.1	0.6	0.7	0.7	-0.8	0	-0.3	0	-0.8	-0.8	-0.4	-1	0.1	-0.8	1.1	1.3	-0.2	-0.4	-0.1

Select residue pair below:

i_j	Score	Prob
0086_0109	1.876	1.00
0078_0086	1.282	0.99
0086_0105	1.265	0.99
0080_0086	0.871	0.83
0086_0111	0.731	0.66
0086_0110	0.578	0.40

Local Interactions:

i_j	Score	Prob
0085_0086	0.597	0.43

See all coupling residues
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