May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [G:0084] and [N:0176]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 -0.1 0.3 -0.1 0.1 0 0 -0.1 -0.6 -0.1 -0.2 0.1 -0.1 -0.6 0.3 -0.4 -0.1 0.8 -0.2 0
F -0.2 0 0 -0.1 -0.1 0 0 0 -0.2 -0.1 0 0.4 0 -0.2 -0.1 0 -0.1 0.3 -0.1 0
I 0 0 0 0 0 0 0 0 -0.1 0.3 0 0 0 -0.1 0 0 0 -0.5 0 0
L -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0 0.1 0 0
V 0.2 0 0 -0.1 0 0 0 0 -0.3 -0.1 -0.1 0 0 0.1 0.3 -0.1 -0.1 -0.1 -0.1 0
M -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.3 0 0
W -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.3 0 0
Y 0 0 0 -0.1 0 0 0 0 -0.1 -0.1 0 0 0 -0.1 0 0 0 0.1 -0.1 0
D 0.1 -0.4 -0.1 -0.8 0.3 0.1 -0.1 -0.4 -0.5 -0.8 0.7 0.3 0.6 1.2 0 0.9 0.3 0.3 -0.4 -0.1
E 0.1 0.4 0.1 -0.3 -0.2 -0.1 -0.1 0.8 -0.3 -0.5 -0.1 0.1 -0.3 -0.1 -0.1 0.3 -0.1 0.7 0.2 -0.1
K -0.2 0.7 -0.1 0.7 -0.1 -0.1 -0.1 -0.2 -0.2 1.1 0.5 -0.1 -0.3 -0.2 0.2 -0.3 -0.5 0 0.5 -0.1
R 0 -0.1 -0.1 0.5 0.1 0 0 -0.1 0.3 0.1 -0.3 -0.2 0.1 -0.5 0.5 0 -0.3 0.4 0.5 0
H 0.2 -0.1 -0.1 0.2 0.1 0 0 -0.1 0.8 0.4 -0.2 -0.1 -0.1 0.1 -0.1 0.1 -0.2 0 -0.2 0
N -0.1 -0.2 -0.1 0.1 -0.1 -0.1 0 0.2 0.6 0.2 -0.1 -0.4 -0.2 0.2 0.3 -0.2 0 -0.1 0.3 0
Q 0.1 0.1 -0.1 0.4 -0.1 -0.1 0 -0.1 -0.1 0.3 0.3 -0.2 -0.1 -0.3 0 0.4 0.2 -0.1 -0.3 0
S -0.2 -0.2 -0.1 0.2 -0.1 -0.1 0 -0.2 0.6 -0.1 0.1 -0.3 0.2 0.6 -0.2 -0.2 0.2 0 -0.1 0
T 0.2 -0.1 -0.1 -0.3 0.3 -0.1 0 -0.1 1.1 0.1 0 -0.2 -0.2 -0.2 -0.4 -0.3 0.7 -0.1 -0.3 0
G -0.1 0.1 0.2 -0.3 -0.1 0.3 -0.1 0.2 -0.4 0 -0.4 0.9 0.3 -0.4 -0.1 0.2 0 0.1 0 -0.1
P 0 0 0 0.1 -0.1 0 0 0 0.1 -0.2 -0.1 -0.1 0 0.5 -0.1 0.2 -0.1 0.2 -0.1 0
C -0.1 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.3 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0084 0.3 -1.3 -1.2 -1.3 -0.7 -1.5 -1.4 -1.2 1.7 1.3 1.2 0.7 0.3 0.8 0.7 1 0.8 1.6 -0.1 -1.4
0176 0.4 -0.3 -0.5 0.2 0 -0.8 -1.1 -0.6 0.9 0.5 0.4 0.1 -0.6 -0.6 0.4 0.6 0.2 2.1 0.2 -1.1
Select residue pair below:
i_j Score Prob
0084_0114 1.078 0.95
0084_0176 0.682 0.58
0084_0111 0.670 0.56
Local Interactions:
i_j Score Prob
0083_0084 1.178 0.98
0084_0085 1.029 0.94
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0162 seconds.