OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [G:0083] and [R:0085]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.3	-0.3	-0.2	-0.2	0.1	-0.1	0	-0.4	-0.5	1	-0.4	0.2	0.1	-0.1	0.5	0.2	0.1	0.3	0.5	-0.2
F	-0.1	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	-0.3	0	0
I	-0.1	0	0	0	0.4	0	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.2	0.1	-0.1	-0.1	-0.1	0	0
L	0.1	0	0	0	0	0	0	0	0.2	-0.1	0.1	-0.1	-0.1	0	-0.1	-0.1	-0.1	0	0	0
V	-0.1	-0.1	0.4	0	0	0	0	0	-0.1	0.1	-0.1	-0.1	-0.1	0	-0.1	-0.1	0	0	0	0
M	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	-0.2	0	0
W	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	0	0	-0.2	0	0
Y	-0.1	0	0	0	0	0	0	0	0	-0.1	-0.1	-0.1	0.6	0	0	-0.1	0	-0.4	0	0
D	0.5	0	-0.2	0	0	0.3	-0.1	-0.1	-0.3	0.3	-0.1	0.2	0.3	-0.4	0.2	0	0.1	0.1	-0.1	0.1
E	0.1	1.1	0.3	-0.1	-0.1	-0.2	-0.1	-0.1	-0.4	-0.2	0.1	0.2	-0.3	0.1	0.2	-0.1	-0.2	0	0	0.3
K	0.2	0.2	-0.1	-0.2	-0.2	0.1	0	0.5	-0.6	0.2	0.5	-0.5	-0.4	0.7	0.2	-0.5	0	0.1	-0.1	0.6
R	0.1	0.3	0.1	-0.1	0.2	-0.1	0	0.3	0.3	0	-0.3	0.2	-0.2	-0.2	-0.6	0.1	0.1	0	-0.1	-0.5
H	0.6	0	0	0	0	0	0	-0.1	-0.1	-0.3	-0.1	0	0	-0.1	-0.2	0.2	0.2	-0.1	0	-0.1
N	0.1	0	0.1	0.2	-0.2	0.3	0	0.3	0.2	0	0.4	-0.6	0.2	-0.3	0.2	0.2	0	0	-0.1	-0.2
Q	0.5	-0.2	-0.1	-0.1	0.2	-0.1	0	0.2	-0.4	0.2	-0.1	0.3	0.1	-0.1	0.1	-0.3	-0.2	0.1	-0.1	-0.2
S	0	-0.4	-0.2	0.5	-0.3	-0.1	0	0.3	-0.4	-0.7	0.5	0.5	0.1	0.3	-0.3	0.6	-0.6	0.5	-0.2	0.2
T	0	-0.1	-0.1	-0.1	-0.1	-0.1	0	-0.3	0	-0.3	0.1	0.2	0.1	0	-0.3	0.4	0.3	0.4	-0.1	0.1
G	-0.5	-0.1	-0.4	-0.1	-0.2	-0.3	-0.1	-0.2	0.7	0.9	0.3	0	0.3	0.2	0.6	0.3	0.2	-0.3	0.1	-0.2
P	-0.3	-0.3	0.2	0.2	0.6	-0.1	0	0	-0.2	-0.2	-0.1	-0.5	-0.5	0	0.1	-0.3	0.5	1.1	-0.1	-0.3
C	-0.1	0	0	0	0	0	0	0	0	-0.1	-0.1	-0.1	0.3	0	0	-0.1	-0.1	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0083	0.3	-1.1	-0.8	-0.9	-0.9	-1.3	-1.3	-1	1.7	1.2	0.8	-0.4	-0.6	1	0.3	1.3	0.2	2.3	0.8	-1.1
0085	0	-0.5	-0.6	-0.3	-0.3	-0.7	-1.1	0	0.3	0.7	0.4	0.3	0.3	0	0.3	0.4	0.5	1.5	-0.7	-0.6

Select residue pair below:

i_j	Score	Prob
0083_0177	1.933	1.00
0083_0111	1.066	0.95
0083_0174	0.873	0.83
0083_0239	0.618	0.47
0080_0083	0.556	0.36

Local Interactions:

i_j	Score	Prob
0081_0083	1.277	0.99
0083_0084	1.178	0.98
0083_0085	0.856	0.82

See all coupling residues
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