May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [L:0078] and [E:0108]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 -0.4 0.1 0.4 -0.1 0 0.9 0.5 -0.4 -0.6 0.3 0.7 0.8 0 -0.1 -0.5 -0.7 -0.6 -0.1 0.1
F 0.4 0 -0.1 -0.3 0.9 -0.6 -1 0.1 0.3 -0.3 0.1 0.4 0.1 -0.1 -0.5 0.5 0.4 0.6 -0.1 -0.4
I -0.7 -0.2 0.4 1 0.9 -0.2 0 0.1 -0.2 -0.2 -0.1 -0.2 0 -0.4 0.1 -0.4 -0.7 0.3 0 -0.1
L -0.2 0 -0.1 0 0.4 0 -0.5 -0.5 0.2 0 0.3 0.4 -0.1 0.5 0.3 -0.1 0.5 -0.3 -0.1 0
V 0.3 0.6 0.4 0.6 0.5 0.1 0.7 -0.4 -0.5 -0.7 0 0.2 0.2 0 0 -0.7 -0.1 -0.6 -0.1 -0.2
M -0.4 -0.2 0.1 -0.7 -0.4 -0.1 -0.2 0.2 0.3 0.6 0.6 0.2 -0.3 0.3 -0.1 0.5 -0.2 0.1 0 -0.1
W -0.1 -0.2 -0.4 0.2 -0.8 0.8 -0.3 -0.1 0.5 0 -0.1 -0.4 -0.3 0.2 -0.2 0.5 0.3 0.3 -0.1 0.1
Y 0.8 0.5 0 -0.3 0.6 -0.7 0.1 0.4 0.3 0.4 -0.1 0 -0.4 -0.2 -0.2 -0.1 -0.3 0.6 -0.1 0.2
D 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 -0.1 -0.1 -0.1 -0.1 0 -0.1 0.2 0.6 0 0 0
K 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 0.5 -0.3 -0.4 -0.1 0.5 -0.1 -0.2 -0.2 0.1 -0.2 0.5 -0.1 0.7 -0.2 -0.3 -0.1 0 0
N -0.1 0 -0.1 -0.2 -0.1 0 0 0 0 -0.1 0 0 0 0 0 0 0.4 0 0 0
Q 0 0 0.7 -0.3 -0.2 0 0 0 0 0 -0.1 -0.1 0.2 0 -0.1 0 -0.1 0 0 0
S -0.1 0 -0.2 0.1 -0.2 0.5 0 0 0 -0.1 -0.1 -0.1 -0.1 0 0.2 -0.1 0.1 -0.1 0 0
T -0.1 -0.1 -0.3 -0.1 -0.2 -0.1 0 -0.1 -0.1 0.7 -0.2 -0.2 -0.1 -0.1 0.1 0.5 0.5 -0.1 0 0
G -0.1 0 -0.4 0.5 -0.1 0 0 -0.1 0 0.3 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 0 0
P 0 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C -0.1 0 0.1 0.3 -0.2 0 0 0 0 0.2 -0.1 -0.1 -0.1 0 -0.1 0 -0.1 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0078 0 1.8 0.3 0.9 1 0.4 1.4 2.2 -0.8 -0.8 -0.8 -0.8 0 -0.7 -0.6 -0.3 -0.5 -0.4 -0.8 -0.5
0108 -0.2 -0.5 0.6 1.1 0.5 -0.8 -0.1 -0.1 -0.1 0.1 0.4 0.3 0.3 -0.3 0.4 0 0.5 -0.2 -1.4 -0.9
Select residue pair below:
i_j Score Prob
0059_0108 1.001 0.92
0080_0108 0.675 0.56
0105_0108 0.673 0.56
0078_0108 0.622 0.47
0104_0108 0.605 0.45
Local Interactions:
i_j Score Prob
0107_0108 1.059 0.95
0108_0109 0.953 0.90
0108_0110 0.718 0.64
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0208 seconds.