OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [A:0072] and [V:0073]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.4	-0.4	1.7	0	0.1	0.3	0.4	-0.5	-0.4	0	-0.3	-0.5	-0.2	-0.5	-0.4	0.5	-0.2	0	-0.2	-0.2
F	0.1	-0.2	0.6	-0.2	-0.6	1.2	-0.7	1.1	-0.1	-0.3	-0.2	0.6	-0.7	0.1	-0.6	-0.3	0	0	1.4	-0.3
I	0.8	0.8	-0.6	-0.4	0.2	-0.3	-0.2	-0.1	-0.1	-0.1	-0.1	-0.2	-0.3	-0.4	-0.1	0.5	-0.2	0.7	-0.1	-0.1
L	0.2	-0.8	-0.5	-0.4	1.4	0	-0.4	-0.4	1.8	-0.3	0.4	-0.2	-0.7	1	0.5	-0.3	-0.2	0	-0.2	-0.1
V	0.7	-0.5	-0.6	0	-0.1	-0.2	-0.3	0.2	-0.2	-0.2	-0.2	0.8	-0.5	-0.3	0.5	0.1	0.2	0.1	-0.1	-0.1
M	-0.1	0	-0.1	-0.2	0.2	1.4	-0.3	-0.6	-0.2	-0.2	-0.2	0	-0.5	0.7	-0.2	0.5	-0.4	0.1	-0.1	-0.1
W	-0.5	-1.1	0.1	1.9	0.1	-0.4	-0.4	-0.7	2.1	-0.3	-0.2	0.4	-0.7	1.1	-0.3	-0.3	-0.5	0.1	-0.2	-0.1
Y	0.3	0.2	-0.2	0.3	-0.1	0.4	0.1	0.1	-0.4	-0.2	0.2	-0.1	0.1	-0.3	-0.2	-0.2	0	-0.2	-0.1	0.5
D	-0.6	-0.8	1.5	-0.1	0.7	0.6	-0.5	-0.5	-0.7	-0.3	-0.3	-0.5	3	-0.6	0.2	-0.4	0.6	-0.4	-0.2	0
E	0.1	-0.8	0.1	-0.4	-0.2	-0.3	-0.4	0.3	-0.6	0.4	-0.2	0.9	1.2	0.2	1.3	-0.3	-0.5	-0.3	-0.2	0.3
K	-0.3	0.7	0	-0.6	1.4	-0.1	0.4	1.3	-0.4	-0.2	-0.2	-0.3	-0.2	-0.5	-0.2	-0.2	0	-0.2	-0.1	-0.1
R	-0.1	0.6	0.2	-0.7	0.1	0	0.8	1.4	-0.7	0	-0.3	-0.5	-0.5	-0.8	-0.4	0.3	0.9	0	0.2	-0.2
H	-0.1	0.3	-0.2	-0.5	-0.1	-0.5	-0.3	0.4	-0.5	-0.2	-0.2	-0.3	-0.2	2.5	-0.1	-0.2	0.5	-0.2	-0.1	0.1
N	-0.7	-0.1	1.4	0	0.1	0	-0.5	-0.9	-0.8	-0.1	-0.3	-0.6	2.3	1.4	-0.4	-0.4	0.1	-0.4	0.1	0.2
Q	0.4	-0.3	-0.3	0.3	-0.6	-0.4	-0.2	-0.4	-0.3	-0.1	1.6	0.6	-0.4	-0.1	-0.2	0.6	0.1	-0.2	-0.1	-0.1
S	-0.4	1.1	-0.4	0.7	0	-0.3	0.6	-0.3	-0.5	0.8	-0.1	0	-0.6	-0.1	0.1	-0.3	0.5	-0.3	-0.1	-0.1
T	0.1	0.8	-0.5	0.1	-0.7	0.3	-0.2	0.3	-0.3	-0.1	0.7	-0.2	-0.4	-0.4	-0.2	0.4	0.1	-0.2	-0.1	-0.1
G	-0.5	1.2	-0.3	0.2	-1.1	0.1	2.5	0.6	-0.4	1.2	-0.4	-0.2	0.1	-0.5	0.3	-0.5	-0.7	-0.5	-0.3	-0.2
P	0.1	0.5	0.8	-0.6	-0.1	-0.4	0.5	-0.5	1.3	0.7	0.4	-0.1	-0.7	-0.7	0	-0.3	-0.5	0.4	-0.2	-0.1
C	-0.3	-0.7	-0.8	2.2	1	-0.4	-0.2	-0.2	1.9	-0.2	-0.1	-0.2	-0.4	-0.5	-0.2	-0.2	-0.3	-0.2	-0.1	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0072	0.3	1	-0.9	0.2	-0.3	-0.3	0.1	-0.4	0.3	0.1	-0.4	0.3	-0.3	0.5	-0.7	-0.1	-0.7	0.7	0.1	-0.6
0073	0	1.2	1.3	1.4	1.6	0.3	-0.4	0.5	0.2	-0.8	-0.9	-0.3	0.4	0.5	-0.6	-0.7	-0.1	-0.7	-1.4	-1.6

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0072_0073	0.597	0.43

See all coupling residues
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