OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [M:0067] and [P:0068]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	-0.3	-0.3	-0.3	-0.4	-0.1	-0.1	0.5	0.4	0	-0.3	-0.3	-0.2	0.3	-0.1	0.4	0.2	0	0.6	-0.1
F	1.1	-0.2	-0.8	0	-0.3	-0.3	-0.1	-0.1	0.1	0.3	-0.1	1.1	-0.2	0.7	0.8	-0.1	-0.4	0.5	0.1	-0.1
I	-0.6	-0.1	0.1	0.3	0.2	-0.1	0	-0.1	-0.1	0.6	0.3	-0.2	-0.1	-0.3	0.1	0.1	-0.1	0	1	0
L	-0.3	-0.2	-0.3	0.2	-0.4	0.4	0	-0.1	0	0.6	0.7	0.5	-0.2	-0.2	0.3	-0.1	0.3	-0.2	0.3	0
V	0.1	-0.2	0	-0.2	-0.2	-0.1	-0.1	0.8	-0.3	0.2	0.1	-0.5	-0.3	0.2	-0.4	-0.2	0.7	0.1	1.2	-0.1
M	0.8	0.3	-0.3	-0.1	0.4	-0.1	0	-0.1	-0.4	0.3	-0.3	0	-0.1	0.2	0	-0.4	0.1	0.7	-0.1	0
W	-0.1	0	0	0	0	0	0	0	-0.2	-0.2	-0.1	-0.1	0	0.6	-0.1	-0.1	-0.1	-0.1	-0.2	0
Y	-0.6	-0.1	-0.2	-0.1	-0.3	-0.1	0	-0.1	-0.3	0.9	0.8	-0.1	0.1	-0.1	0.7	0.1	-0.4	0.2	0.4	0
D	-0.5	-0.2	0.9	0.6	0.5	0.4	0	0.2	-0.5	-0.4	-0.5	0.4	0.2	-0.3	-0.4	0.1	-0.3	-0.1	-0.4	0
E	-0.6	0.1	0.6	0.2	0.6	-0.1	0	0.2	-0.6	-0.9	0.1	0.3	0.7	-0.4	-0.6	-0.2	0.1	0.1	0.2	0
K	0.2	-0.2	-0.4	-0.2	-0.1	-0.1	0	-0.3	0	0.7	0.1	-0.1	0.3	-0.5	0.1	0.5	0.3	-0.4	-0.1	0
R	0.1	0.6	-0.3	-0.2	-0.3	-0.1	0	-0.2	0.5	-0.1	0	0.4	-0.3	-0.4	-0.3	0.4	0.3	0.2	-0.7	0
H	-0.1	-0.1	-0.1	-0.1	-0.1	0	0	-0.1	0.1	0.2	0.4	-0.2	-0.1	-0.2	-0.2	0.5	-0.1	-0.3	-0.5	0
N	-0.4	-0.1	-0.1	0	-0.1	0	0	-0.1	0.1	-0.2	1.1	-0.2	-0.1	-0.1	-0.2	0.2	0.3	-0.2	-0.4	0
Q	0.1	-0.1	0.2	-0.1	-0.2	0	0	0.3	-0.1	-0.3	-0.5	-0.2	0.6	-0.2	0.2	-0.1	-0.3	0.4	-0.1	0
S	0.4	-0.1	0.3	0.1	-0.1	0	0	-0.1	0.6	-0.7	0.3	-0.3	-0.2	-0.2	-0.5	-0.3	0.4	-0.3	0.5	0
T	0.1	0	-0.1	-0.2	0.1	-0.1	-0.1	-0.5	1	-0.1	0.1	0.1	0.4	0.7	0.6	-0.5	-0.7	-0.2	-0.1	-0.1
G	-0.1	-0.2	0.7	-0.2	0.1	-0.1	0	-0.2	-0.1	-0.2	-0.4	0	-0.2	0.5	-0.1	-0.2	0.2	0.2	0.3	0
P	0.4	0.4	-0.3	0.3	0.2	-0.2	-0.1	0.2	1	0.2	-0.7	0	-0.2	0.3	0.3	0	0.1	0.1	-0.9	-0.1
C	-0.2	0	0.4	0	0.7	0	0	0	-0.3	-0.3	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0067	0.5	0	0.2	0.3	0.7	-0.3	-1.3	-0.1	0.3	0.4	0.5	0.1	-0.5	-0.6	-0.2	0	1.2	0.1	0.7	-1.5
0068	0.8	-0.4	-0.3	-0.7	0	-1.4	-1.6	-0.6	1.4	1.2	0.8	-0.1	-0.6	-0.1	0.7	0.6	0.3	0.9	0.7	-1.6

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0067_0069	0.792	0.74
0066_0067	0.640	0.50
0067_0068	0.609	0.45

See all coupling residues
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