May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [W:0059] and [E:0108]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.3 -0.4 0.9 -0.4 -0.1 1.9 -0.2 -0.1 0.2 -0.3 0.1 0 -0.1 -0.3 -0.2 -0.4 -0.2 0 -0.1
F 0.1 0.3 0.1 0.5 0.1 0.3 -0.6 -0.3 -0.5 0.2 0 0.6 0.5 -0.4 0 0.3 0 0 -0.1 0.1
I -0.1 0.3 -0.2 -0.3 -0.1 0.3 0.3 -0.2 0.5 0.4 -0.1 0.2 -0.3 0 0 -0.2 -0.3 0 0 -0.1
L 0 -0.3 -0.5 -0.3 0 0.4 -0.1 0.4 0.6 0.2 0.6 0.1 -0.1 -0.5 0.4 -0.4 0.3 0.6 -0.1 -0.2
V -0.1 0.1 -0.2 -0.5 0 -0.2 -0.3 1.3 0.2 -0.3 0 -0.3 0.4 -0.2 0.4 0 -0.1 -0.3 0 -0.1
M -0.2 0 -0.1 0.1 -0.2 -0.1 0 -0.1 0.4 0.1 -0.1 0.2 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 0 0
W -0.3 -0.2 0.4 0.3 0.6 0 0.5 -0.3 -0.5 0 0.3 0.1 0.1 -0.1 0.4 0 0.3 -0.7 -0.1 0
Y -0.1 0.2 1.2 0.7 0.9 -0.1 -0.5 -0.2 -0.5 0.1 0.1 -0.2 0.2 0.1 -0.4 -0.1 0 0.1 -0.2 -0.2
D 0.5 0 -0.2 -0.4 0.2 0 0 0.3 0 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 0 0
E -0.1 0 -0.2 -0.5 0 -0.1 0 -0.1 0.8 -0.1 0.1 0.2 -0.2 -0.1 0.3 0.4 -0.1 -0.1 0 0
K -0.2 0 -0.2 0.1 -0.2 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1 0.5 0.1 0.1 0.3 0.3 0 0
R 0.3 -0.1 -0.3 -0.2 -0.4 -0.2 -0.1 -0.1 0.2 0 -0.2 -0.4 0.1 0.6 -0.4 0 0.4 0.2 0 0
H 0.5 -0.2 0.5 0.6 0.4 -0.3 -0.5 -0.6 -0.1 -0.2 -0.2 0.1 0.2 0.4 -0.3 0 0.3 -0.1 -0.1 0
N -0.1 0 0.6 -0.3 -0.1 0 0 0 0 0 0 -0.1 0 0 0 0 -0.1 0 0 0
Q 0.1 -0.1 -0.4 -0.3 -0.3 -0.1 -0.1 -0.1 -0.2 -0.2 -0.3 0.4 0.4 -0.2 0.2 -0.2 0.3 0.7 0 0
S -0.1 -0.2 0 0.7 0 -0.2 -0.2 0.1 -0.3 -0.3 -0.1 0.1 0.2 -0.2 -0.3 0 0.2 0.1 0 -0.1
T -0.2 0.1 0 -0.1 0.4 0 -0.2 0 -0.3 0.1 0.1 -0.1 -0.4 0.1 0.1 0.2 -0.5 -0.2 0 -0.1
G -0.1 0.3 0.2 0.2 -0.3 -0.1 0.2 0.1 -0.2 0.2 0.5 -0.4 -0.3 0.1 -0.1 -0.2 -0.5 -0.2 0 -0.1
P -0.1 0 -0.1 -0.1 -0.1 0 0 0 0 0 0 -0.1 0 0 -0.1 0 0 0.3 0 0
C 0.3 0 -0.1 -0.4 -0.2 0.3 0 0 -0.1 0 -0.1 0 -0.1 0.4 -0.1 -0.1 -0.2 -0.1 0 0.4
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0059 -0.2 1 0.2 0.9 0.6 -0.4 1.2 1.6 -0.7 -0.6 -0.7 -0.1 0.9 -1 -0.3 -0.1 0.3 -0.2 -1.1 -0.6
0108 -0.2 -0.5 0.6 1.1 0.5 -0.8 -0.1 -0.1 -0.1 0.1 0.4 0.3 0.3 -0.3 0.4 0 0.5 -0.2 -1.4 -0.9
Select residue pair below:
i_j Score Prob
0053_0059 1.555 1.00
0059_0108 1.001 0.92
0059_0081 0.898 0.86
0059_0078 0.618 0.47
0059_0109 0.574 0.39
0059_0080 0.572 0.39
0051_0059 0.569 0.39
Local Interactions:
i_j Score Prob
0059_0061 0.587 0.41
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0108 seconds.