May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
India-Argentina Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [P:0056] and [V:0058]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.4 -0.2 -0.3 -0.1 0.3 -0.1 0.5 0.3 0.7 -0.1 0 0 -0.1 -0.2 -0.1 -0.2 0.6 -0.2 -0.1 -0.2
F -0.1 -0.1 -0.2 -0.2 -0.4 -0.1 0 0 -0.1 0.4 0 0 0 0 0.4 -0.1 0.2 0 0 -0.1
I -0.1 -0.1 -0.3 0.2 -0.3 0 0 0 0 0 0 0 0 0 0 -0.1 0.1 0.3 0 -0.1
L -0.2 -0.1 0.2 0.1 0.3 -0.1 -0.1 0 -0.1 0 0 0 0 -0.1 0 -0.1 0.4 -0.1 0 -0.1
V 0.3 -0.1 -0.2 -0.4 0.1 -0.1 0 0 0.3 0 0 0 0 0 0 -0.1 -0.3 -0.1 0.4 -0.1
M 0 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
W 0 0 -0.1 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
Y -0.1 -0.1 -0.4 0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0.2 0 0 -0.1
D 0 0.3 0.9 0.8 1.1 0.7 -0.5 -0.1 -0.5 -0.3 -0.1 -0.1 -0.3 -0.5 -0.2 -0.1 -0.1 -0.2 -0.2 0.2
E 0.1 0.5 0.6 0 0.6 -0.5 -0.4 -0.1 0 -0.2 -0.1 -0.1 -0.2 -0.4 -0.1 0.2 0.6 -0.2 -0.1 0.2
K 0 0.8 -0.3 0.5 0.1 0.1 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 0.2 -0.1 0.4 0 -0.2 -0.1 -0.1
R 0 -0.2 -0.3 0.7 0.3 -0.1 -0.1 0 -0.1 0 0 0 0 -0.1 0 -0.3 -0.2 0.2 0 0.5
H -0.2 -0.1 0.9 0.1 -0.5 0.3 0 0 -0.1 0 0 0 0 -0.1 0 -0.1 -0.2 -0.1 0 0
N 0.1 -0.4 0.4 -0.2 -0.3 -0.4 0.5 -0.1 -0.2 -0.1 0 0 0.6 0.4 -0.1 -0.3 0 0.3 -0.1 0.3
Q -0.4 -0.1 -0.1 -0.2 0 0.3 -0.1 0 -0.1 0 0 0 0 0 0 0.3 -0.1 0.3 0 0
S 0 -0.2 -0.1 0 0 -0.1 0.2 -0.1 0.9 -0.1 0 0 -0.1 -0.2 -0.1 0.2 -0.2 0.2 -0.1 0.1
T -0.5 -0.4 -0.4 0.1 -0.5 -0.2 -0.2 0 0.1 0.5 0 0 0.3 0.7 0.3 0.5 -0.1 0 0.4 -0.1
G 0.6 0.6 0.2 -0.3 0.3 0 0.8 -0.1 -0.1 -0.1 0 0 -0.2 -0.1 -0.2 -0.2 -0.3 0.1 -0.1 0.1
P 0.2 0 0.6 0.6 0.7 0.6 -0.5 -0.1 -0.6 0 -0.1 -0.1 0.1 0.4 -0.2 0.1 0.7 -0.5 -0.2 -0.7
C -0.1 0.2 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0 0 -0.2 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0056 1.1 -1.1 -0.9 -0.3 -0.7 -1.4 -1.4 -1.1 1.6 1 0.7 -0.1 -0.5 0.7 -0.3 1 0.7 1.4 1.9 -1.2
0058 0.2 0.2 1.3 2.1 1.5 0.4 -0.1 -0.8 0.1 -0.6 -1 -1 -0.5 -0.2 -0.7 0.2 1.1 -0.6 -0.7 -0.2
Select residue pair below:
i_j Score Prob
0053_0056 2.695 1.00
0056_0200 0.565 0.38
Local Interactions:
i_j Score Prob
0055_0056 1.921 1.00
0056_0057 1.318 0.99
0056_0058 0.777 0.72
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...
Page generated in 0.0123 seconds.