OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [A:0055] and [V:0058]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.3	-0.4	0.2	0.2	0.8	-0.6	-0.3	-0.2	0.1	0	-0.1	-0.1	-0.3	-0.1	-0.2	0.2	0.6	-0.5	0.2	0.2
F	-0.2	0.2	-0.4	0.6	-0.3	-0.1	0.4	0	0	0	0	0	0	0	0	-0.1	-0.2	0	0	-0.1
I	-0.2	-0.1	-0.3	-0.1	0.4	-0.1	0	0	0.4	0	0	0	0	-0.1	0	-0.1	-0.3	0.4	0	-0.1
L	0.4	0.1	-0.2	0.5	-0.3	-0.2	-0.1	0	0.3	-0.1	0	0	0.4	-0.1	0	-0.1	-0.2	-0.1	-0.1	-0.1
V	-0.3	0.2	0.3	-0.5	0.1	0.2	-0.1	0	0.4	0	0	0	0.4	-0.1	0	-0.1	-0.3	-0.1	-0.1	-0.1
M	0	0	0	-0.2	0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
W	0	0	0	-0.3	0.3	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
Y	-0.2	-0.1	0.1	0.3	-0.6	0.3	0	0	0.4	0	0	0	0	0	0	-0.1	-0.2	0	0	-0.1
D	-0.4	-0.4	0.2	-0.1	0.1	-0.2	0.2	-0.1	-0.2	-0.1	0	0	-0.1	-0.1	-0.1	0.3	1.5	-0.2	-0.1	-0.2
E	-0.1	0.3	0.1	0.4	-0.1	-0.1	0.6	0	-0.2	-0.1	0	0	-0.1	-0.1	-0.1	-0.2	-0.5	0.6	-0.1	-0.1
K	-0.4	0.2	0	-0.1	0.3	-0.2	-0.1	-0.1	0.5	0.3	0	0	-0.1	0.5	-0.1	-0.1	-0.1	0.1	-0.1	-0.2
R	-0.5	-0.1	0.3	0.3	0.5	0.3	-0.2	0	-0.2	-0.1	0	0	-0.1	0.2	0.4	-0.1	-0.3	-0.1	0	-0.2
H	0.4	-0.1	0.2	-0.1	-0.8	-0.1	0	0	0	-0.1	0	0	0	0.4	0	-0.1	0.1	0	0.4	-0.1
N	0.5	-0.4	0.1	-0.1	-0.1	0.3	-0.1	-0.1	-0.3	0.7	0	0	-0.1	-0.2	-0.1	-0.4	0.8	-0.3	0	0
Q	-0.3	0	0	0.1	-0.5	0.7	-0.1	0.4	-0.1	-0.1	0	0	-0.1	-0.1	-0.1	0.6	-0.3	-0.1	0	-0.1
S	1.3	-0.2	0	0.4	0.3	-0.4	0.1	-0.1	-0.2	-0.2	-0.1	-0.1	0.1	-0.5	-0.1	0.2	-0.4	-0.3	-0.1	0.6
T	-0.6	0.3	0.2	0.3	0.4	-0.2	0.5	-0.1	-0.2	-0.1	-0.1	-0.1	-0.2	-0.2	0.3	-0.2	0.5	-0.1	-0.1	0.2
G	0.4	0.9	0	0.3	-0.7	-0.3	-0.5	-0.1	-0.5	-0.3	-0.1	-0.1	0	0	-0.1	0.3	0.5	0.6	-0.2	0.5
P	-0.1	0.2	0.1	-0.1	0.1	1.1	-0.3	0	-0.1	-0.1	0	0	-0.1	-0.1	-0.1	-0.3	0	-0.1	0	-0.1
C	0.3	-0.2	-0.2	-0.3	0.5	-0.1	0	0	-0.1	0	0	0	0	0	0	0.3	-0.3	-0.1	0	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0055	0.5	-0.7	-0.4	0.1	0	-1	-0.9	-0.6	0.6	0.2	0.6	-0.1	-0.1	0.9	0	0.3	0.9	0.9	-0.1	-0.7
0058	0.2	0.2	1.3	2.1	1.5	0.4	-0.1	-0.8	0.1	-0.6	-1	-1	-0.5	-0.2	-0.7	0.2	1.1	-0.6	-0.7	-0.2

Select residue pair below:

i_j	Score	Prob
0058_0198	1.136	0.97
0058_0203	0.956	0.90
0058_0205	0.912	0.87
0055_0058	0.836	0.80
0058_0247	0.657	0.53

Local Interactions:

i_j	Score	Prob
0057_0058	1.188	0.98
0056_0058	0.777	0.72

See all coupling residues
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