OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [Q:0053] and [W:0059]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.2	0.2	-0.3	0.1	0.5	-0.2	0.4	-0.3	-0.2	-0.2	-0.2	0.1	0	-0.1	-0.1	0.1	0.4	0.2	-0.1	0.2
F	0	-0.3	-0.1	-0.1	-0.1	0	-0.3	0	0	0	-0.1	-0.1	-0.2	0	0.3	0.3	-0.3	0	0	0.7
I	-0.1	-0.1	-0.1	0.2	-0.2	0	-0.2	0.4	0	0	-0.1	-0.1	-0.1	0	-0.1	-0.1	-0.1	-0.1	0	0.4
L	-0.2	-0.5	-0.2	0.4	-0.3	-0.1	0	-0.4	-0.1	1	0.3	0.2	-0.2	0	0.5	-0.1	0.4	-0.1	0	-0.1
V	-0.2	-0.3	-0.1	-0.2	-0.3	-0.1	0.1	0	0	0	0.1	0.2	0.3	0	-0.1	-0.3	0.1	-0.1	0	0
M	0.3	-0.3	0.2	0.1	-0.1	0.4	-0.4	0	0	0	0.2	-0.1	-0.3	0	-0.1	-0.2	-0.2	0.7	0	-0.1
W	0.4	-0.3	0	0.2	-0.1	0.4	-0.3	-0.6	0	0	0	0	-0.2	0	0	-0.1	-0.2	0.4	0	0
Y	-0.1	-0.3	0.2	-0.1	0.5	0	0.2	-0.2	0	0	0	0	-0.1	0	0	-0.1	-0.1	-0.1	0	0
D	-0.3	0.1	-0.2	0	0	-0.1	-0.6	0.1	-0.1	-0.1	0.5	0.7	0.5	-0.1	-0.2	-0.3	0.1	-0.1	0	-0.1
E	0.6	1.3	-0.3	0.8	0.1	-0.2	-0.1	0.3	-0.5	-0.4	0.1	0.2	0.6	-0.2	-0.1	-0.4	-0.9	-0.2	0.1	-0.3
K	-0.3	0.2	0.2	-0.4	-0.2	-0.2	0.6	1	0.1	0.2	-0.2	-0.4	-0.2	0.3	-0.2	0.7	0.2	-0.7	-0.1	-0.2
R	0.4	0.6	0	0.6	-0.2	0.2	0.1	-0.1	-0.3	-0.2	-0.2	-0.5	-0.2	-0.1	0.2	0	0	0.6	-0.1	0.1
H	0.4	-0.2	0.2	-0.4	0.7	-0.1	0.2	0.4	-0.1	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	0	-0.4	-0.1	0	0
N	-0.2	0.1	0.1	-0.2	-0.2	0	0.3	0.1	0	0	0	-0.1	0.6	0	-0.1	0.2	-0.2	-0.1	0	-0.1
Q	-0.2	0.6	0.2	-0.1	-0.1	0.1	1	0.5	0.4	-0.2	-0.2	-0.3	0	-0.1	0	-0.7	-0.2	0.1	-0.1	-0.2
S	-0.3	-0.4	0.1	-0.2	0.2	0.1	-0.1	0	0.3	-0.1	-0.1	-0.2	-0.5	0	0.4	0.8	0.2	0	0	-0.1
T	-0.5	-0.7	0.3	-0.1	0.3	-0.2	-0.5	-0.4	0.2	0.2	0.1	0.7	0.4	-0.1	0.5	0	0.6	-0.2	-0.1	-0.2
G	0.2	0.4	0	0.1	0.4	0	-0.2	-0.6	0	0	-0.1	0.1	0	0	-0.2	0.1	0	0	0	-0.1
P	0.1	0.4	0.1	-0.1	-0.5	-0.2	0.8	0.1	0.1	-0.1	-0.2	-0.4	0	0.3	-0.5	0.2	0.6	0	-0.1	-0.1
C	-0.1	-0.2	0	-0.1	-0.1	0	-0.2	0.1	0	0	0	-0.1	0.2	0	-0.1	-0.1	0.2	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0053	0.5	-0.7	-0.7	0.6	-0.3	-0.2	-1	-0.8	-0.5	0.8	0.9	1	-0.1	-0.3	0.7	0.4	0.8	0	0.6	-0.9
0059	-0.2	1	0.2	0.9	0.6	-0.4	1.2	1.6	-0.7	-0.6	-0.7	-0.1	0.9	-1	-0.3	-0.1	0.3	-0.2	-1.1	-0.6

Select residue pair below:

i_j	Score	Prob
0053_0056	2.695	1.00
0053_0057	1.921	1.00
0053_0059	1.555	1.00
0053_0178	0.732	0.66
0053_0099	0.721	0.64

Local Interactions:

i_j	Score	Prob
0053_0055	1.493	1.00
0053_0054	0.889	0.85

See all coupling residues
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