OPENSEQ.org -1515595952- GREMLIN Submission

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India-Argentina

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Coupling matrix for [V:0050] and [R:0052]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.7	0	0	-0.3	0.1	-0.2	-0.1	-0.6	0.3	0.4	-0.1	0.5	-0.4	-0.2	0.1	0.5	0.2	-0.2	0.4	-0.2
F	0.6	-0.1	-0.3	-0.2	-0.5	-0.1	0	-0.2	0.2	-0.3	0	0	-0.3	-0.1	-0.2	0.1	0.5	0.4	-0.1	0
I	-0.1	-0.1	-0.4	-0.3	-0.6	-0.1	0	-0.2	-0.3	0.2	0.6	0.1	0.3	-0.2	0.6	0.2	0.2	-0.1	-0.1	0
L	-0.1	0.2	-0.3	-0.4	-0.3	0.9	0	0.1	-0.4	-0.1	-0.6	0.1	-0.1	0.5	0.1	0.1	-0.1	-0.1	0.4	0.1
V	0	-0.3	-0.5	-0.6	-0.1	0	-0.1	-0.5	-0.4	0.1	0.6	0.6	0.3	0.2	0.5	-0.4	0.4	0.3	0.2	-0.1
M	-0.2	-0.1	0.3	0.4	-0.2	-0.1	0	-0.2	-0.2	0.1	0.4	-0.4	0	-0.2	-0.2	-0.3	0.6	0	-0.1	0
W	-0.1	0	-0.1	-0.1	-0.2	0	0	-0.1	-0.1	0.1	-0.1	0.3	-0.1	0	-0.2	-0.1	-0.2	0	0	0
Y	-0.2	-0.1	-0.3	-0.2	1.2	-0.1	0	-0.1	-0.2	0.2	-0.4	-0.4	0.1	0.3	0	-0.3	0.1	0	-0.1	0
D	0.1	0.1	0.5	-0.3	0.7	-0.3	-0.1	0.4	-0.2	0.3	0.4	0.3	-0.5	-0.4	0.2	-0.4	-0.1	-0.1	-0.2	-0.1
E	0.1	0.1	1.1	-0.2	0.8	-0.7	-0.1	0.1	-0.4	-0.2	0.3	0.5	-0.7	-0.2	0.1	0.3	0.4	0	-0.1	-0.1
K	-0.8	0.1	0.6	0.1	0.5	-0.6	0.3	0.2	0.3	0.3	0.1	-0.3	0	0.1	0.1	-0.2	0.2	0.4	-0.5	-0.3
R	0.3	0.2	0.1	1	0.3	-0.5	-0.1	-0.5	1	0.6	-0.5	0.2	0.1	0.1	0.2	-0.3	-0.3	-0.2	-0.4	-0.2
H	0	-0.2	0	0.1	-0.2	0.1	0	0.7	0.3	0.3	0	-0.2	0.1	-0.2	-0.2	-0.1	-0.6	-0.1	-0.1	-0.1
N	-0.2	0.1	0.4	-0.3	0.2	-0.3	-0.1	0.9	0	-0.4	-0.1	-0.6	0.7	0.1	-0.3	0	0.2	0.3	-0.2	-0.1
Q	-0.3	0.2	0.2	0.2	0.1	0.1	-0.1	0.3	0	-0.7	0	0.6	0.1	-0.1	-0.2	0	0.1	-0.2	0	0.2
S	-0.1	-0.6	-0.1	0.2	-0.7	-0.2	-0.1	0.1	0.7	0.1	0.2	0.1	0.1	0.5	-0.1	1	0.5	-0.2	-0.1	-0.2
T	0.4	-0.1	-0.5	0.3	-0.4	-0.2	-0.1	-0.9	0.2	0.4	0.1	0.2	0.3	0	0.5	0.2	0.5	-0.3	0.3	0.3
G	-0.3	0.9	0	0.4	0.2	-0.4	-0.1	0.7	-0.4	0.1	-0.1	-0.2	1.6	-0.2	-0.2	0	-0.7	-0.2	-0.3	-0.2
P	0.7	-0.1	-0.5	0.3	0.1	-0.3	-0.1	0.3	0	-0.2	-0.1	0.1	-0.2	0	-0.3	0.3	-0.1	-0.1	0.6	0.2
C	0	0	-0.1	-0.1	-0.1	0	0	0	0	-0.2	-0.1	-0.1	-0.1	0	-0.1	-0.1	-0.1	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0050	0.8	-1.2	-0.8	-0.4	0.2	-1	-2.1	-1.2	0.1	1.3	1.2	1	-0.6	0.1	0.8	1	1.4	0.6	0.5	-2.3
0052	0.3	-0.4	0.8	0.3	1	-0.8	-1.9	0	-0.2	1.5	0.8	0.9	0.7	-0.1	1.3	0.3	1.2	-1.4	-1.1	-1.5

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0050_0052	1.074	0.95

See all coupling residues
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