May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

India-Argentina Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [L:0049] and [F:0051]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.5 -0.2 -0.4 0.2 0 0.8 0.1 -0.2 0.1 0.1 0.4 0.1 -0.2 -0.2 -0.2 0.2 1 -0.2 -0.2
F 0.2 -0.6 0 -0.2 0.3 0.1 -0.1 -0.1 0.1 -0.1 0.4 0.3 0.8 -0.2 -0.3 0.5 0 -0.3 -1.2 1.3
I -0.1 0.8 -0.1 -0.9 0.4 -0.7 -0.5 -0.3 -0.2 -0.3 -0.3 0.3 -0.1 0.4 0.5 0.8 0.9 -0.3 0.5 -0.2
L 0.2 0 0.7 -0.1 0.7 0.3 0 0 0.1 -0.3 -0.4 -0.5 -0.1 -0.2 -0.2 0.4 0 -0.4 1.4 -0.2
V 0.3 1 -0.4 -0.3 -0.1 -0.4 0.5 0.1 0.2 0.9 -0.3 -0.3 -0.1 -0.2 -0.2 0.6 0.2 -0.3 -0.2 -0.2
M 0.1 -0.1 0.6 -0.1 0 0.1 0 0.3 -0.2 0.1 0.3 -0.3 -0.4 0.9 -0.2 0.1 0.2 -0.3 -0.1 -0.2
W -0.2 0.3 0.1 -0.4 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 -0.1 0.2 0 -0.2 0
Y -0.3 0.1 0.1 0.3 0.4 -0.2 0.3 -0.1 -0.1 -0.2 -0.3 0.1 0.2 -0.1 0.2 0.2 0.5 -0.2 -0.4 -0.1
D 0.8 -0.4 -0.7 0.3 0 -0.2 0.5 -0.1 0 -0.1 -0.1 0 -0.1 -0.1 0 -0.2 -0.4 -0.1 0.6 0
E -0.2 0.4 0.1 0.7 -0.3 0 -0.2 -0.1 -0.1 0.3 0.3 -0.1 0.2 -0.1 -0.1 -0.4 0 0.3 -0.5 -0.1
K -0.4 -0.1 0.9 0.6 0.3 0 -0.4 -0.1 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 0 0 -0.4 -0.1 0 0
R 0 0.1 0.2 0 -0.6 0 0.2 -0.1 -0.1 -0.1 0.3 0.2 -0.1 -0.1 0.4 -0.3 -0.3 -0.1 0.2 -0.1
H -0.2 0.5 0.3 0 -0.2 -0.3 0.2 0.7 0.4 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.3 -0.5 -0.1 -0.2 0
N -0.3 0.1 0.2 0.3 -0.5 -0.1 -0.2 0 0 -0.1 -0.1 0 -0.1 0 0 0.2 -0.3 0 0.6 0
Q -0.1 0.3 0.4 1.1 0 0 0 0.2 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 0.1 -0.4 -0.7 -0.1 -0.1 0.3
S 0.1 -0.5 -0.4 0.2 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.2 0.3 -0.1 0.3 0.1 0.3 0.9 -0.1
T 0.7 0.2 0.7 -0.2 0.8 -0.5 -0.4 -0.1 -0.1 -0.2 0.7 0.1 -0.2 -0.1 -0.1 0 0.3 -0.2 -0.8 -0.1
G 0.7 -0.8 -1 0.3 0.2 0.2 0.7 -0.2 0.1 -0.2 -0.2 0.5 0.4 -0.2 -0.1 0 0.4 -0.3 0.3 -0.2
P 0.2 0.1 -0.3 0.5 0.4 0.5 -0.4 -0.2 0.2 -0.2 -0.2 -0.3 -0.2 -0.1 -0.1 -0.2 0.3 0.3 0 -0.1
C -0.2 0.3 -0.1 -0.3 -0.1 0 0 0 0 0 0 0 0 0 0 -0.1 -0.1 0 -0.1 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0049 0.9 1.3 0.6 1.4 0.8 0.3 -1.7 0.4 -0.6 -0.1 -0.3 -0.4 -0.6 -1.1 -0.3 0.1 0.3 0.8 0.5 -1.9
0051 1.1 0.7 1.7 1.7 1.3 0.1 0.4 -0.7 -0.7 -0.7 -0.6 -0.6 -0.6 -0.7 -1.1 -0.1 0.4 -0.7 0.5 -1
Select residue pair below:
i_j Score Prob
Local Interactions:
i_j Score Prob
0048_0049 0.585 0.41
0049_0051 0.547 0.35
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M E L P N ...

Page generated in 0.013 seconds.