OPENSEQ.org -1515595952- GREMLIN Submission

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Coupling matrix for [Q:0044] and [R:0045]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	0.9	-0.3	-0.5	-0.2	-0.4	-0.2	-0.1	0.2	0.2	-0.6	-0.1	-0.2	0.5	0.6	-0.2	0.2	0.4	0.1	0.1
F	0	0.2	-0.3	-0.4	-0.5	-0.3	-0.3	0.2	0.4	-0.2	0.8	0.2	0.6	0.1	-0.1	-0.2	-0.4	-0.1	-0.5	0.7
I	-0.3	0.1	-0.2	0	-0.3	-0.2	-0.2	-0.1	-0.3	0.5	-0.2	0.4	0.1	0	0.8	-0.1	0	-0.3	0.4	-0.1
L	0.3	-0.2	-0.4	-0.7	-0.4	-0.2	-0.3	0.4	0.1	0.7	-0.2	0.1	-0.2	-0.5	-0.1	-0.2	0.4	0.6	0.8	0.1
V	0	-0.3	-0.3	0.5	-0.2	0.1	0.2	0.2	0.1	-0.2	-0.3	0.6	0.5	-0.4	-0.5	-0.1	0.3	-0.4	0.8	-0.1
M	0.1	-0.3	0.6	-0.4	-0.1	-0.3	-0.3	-0.2	-0.1	-0.3	0	-0.3	-0.1	0.2	-0.4	0.8	0.8	-0.1	0.5	-0.1
W	0.2	-0.1	-0.1	0.2	-0.2	-0.1	-0.1	-0.1	-0.1	0.2	-0.1	-0.1	-0.1	-0.1	-0.2	0.5	-0.1	-0.1	-0.2	0
Y	-0.3	0	-0.5	-0.7	0.4	-0.3	-0.1	-0.2	-0.3	-0.3	0.6	0.6	-0.1	0.7	0.4	0.3	0.1	-0.3	-0.4	-0.1
D	-0.3	0.2	0.6	0.4	-0.2	0	0.6	-0.2	-0.4	-0.1	-0.5	-0.5	-0.2	0.3	-0.1	0.3	0.1	-0.1	0.7	-0.1
E	-0.2	-0.4	-0.2	0.3	0.5	1	-0.2	-0.2	0.7	-0.7	0.3	-0.1	0.2	-0.5	0.2	-0.2	0.1	-0.2	-0.1	-0.1
K	-0.4	0.3	0.2	0	0.2	-0.1	1.2	0.3	-0.3	0	-0.2	0.4	-0.1	-0.3	0	-0.1	-0.3	-0.2	-0.4	0
R	0	0	0.3	0.8	0.1	-0.2	0.3	0.2	-0.5	0.2	-0.1	-0.5	-0.2	0.2	-0.5	0.2	0.2	0.5	-0.5	-0.1
H	0.6	-0.2	-0.2	0.1	0.1	0.3	-0.1	-0.1	0.7	0.2	0.1	-0.2	-0.1	0.1	-0.3	-0.4	-0.2	-0.2	-0.3	0
N	-0.5	-0.3	0.2	0.1	-0.4	-0.3	1	-0.2	0.4	-0.3	0.1	-0.1	0.3	-0.1	0.1	0	-0.1	-0.3	0.3	-0.1
Q	0.2	-0.4	-0.2	0.2	0.3	-0.2	-0.2	-0.2	0.1	0.4	0.3	-0.1	0.2	-0.4	-0.2	0.8	-0.5	0.3	0	-0.1
S	0.3	0.5	0.6	-0.2	0.1	-0.3	0	0.1	0.5	-0.6	-0.3	-0.1	-0.2	0	0.4	0.3	0	-0.3	-0.4	0.1
T	-0.1	0.5	-0.2	0.2	0.2	0	-0.4	-0.3	0.4	0.3	0.1	0.1	-0.3	-0.1	0.3	-0.6	0	0.9	-0.3	-0.1
G	0.1	-0.1	0.3	-0.2	0	0	0.1	0.1	-0.3	-0.1	0.1	0.1	-0.2	0.4	-0.3	0.8	0.1	0.2	-0.2	-0.1
P	0.3	-0.1	0.7	1	1.1	0	-0.5	0	-0.5	0	0.3	-0.1	0.1	0	-0.2	-1.2	0.1	-0.1	0.2	-0.2
C	0.5	-0.1	-0.1	-0.3	-0.1	-0.1	0	0.4	-0.1	-0.2	-0.1	0.3	-0.1	-0.1	0.2	-0.2	-0.1	-0.1	-0.2	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0044	1.4	-0.5	-0.5	-0.1	0.1	-0.5	-1.4	-0.5	0.2	0.2	-0.3	0	-0.6	0	0.1	0.4	0.6	0.5	1.3	-1
0045	1	0	-0.2	0.9	0.1	-0.6	-0.8	-0.7	0.3	0.5	0.5	0.1	-0.8	0	0.8	0.6	-0.1	0.2	0.6	-1.3

Select residue pair below:

i_j

Score

Prob

Local Interactions:

i_j	Score	Prob
0044_0045	0.890	0.85
0043_0045	0.668	0.55
0045_0046	0.589	0.42

See all coupling residues
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