OPENSEQ.org -1515484907- GREMLIN Submission

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PRMT5 1-300

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Coupling matrix for [D:0211] and [T:0238]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.7	-0.1	-0.2	-0.2	-0.1	0.3	0	-0.1	-0.2	-0.1	-0.1	0.5	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	0.7	-0.1
F	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	-0.1	0	-0.1	0
I	-0.2	-0.1	-0.2	0.3	0	0.4	0	0	-0.1	-0.1	0.4	-0.2	0	-0.1	-0.1	-0.2	0.9	-0.1	-0.3	0
L	0.3	-0.1	-0.2	-0.2	0	-0.1	0	0	0.4	0.3	0.7	-0.1	-0.1	-0.1	-0.1	-0.3	-0.4	-0.1	0.1	0
V	0.5	0.3	-0.2	-0.4	-0.1	-0.1	0	0	-0.1	0.2	0.4	-0.3	-0.1	0.2	-0.3	0.4	-0.1	-0.1	0.1	-0.1
M	-0.1	0	0.5	-0.1	0	0	0	0	0	-0.1	0	-0.1	0	0	-0.1	-0.1	-0.1	0	-0.1	0
W	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	0	-0.1	0	-0.1	0
Y	-0.1	0	-0.1	-0.1	0	0	0	0	0	0	0.5	-0.1	0	0	0	-0.1	-0.2	0	-0.1	0
D	-0.3	-0.2	-0.5	0	-0.2	-0.4	-0.1	0.3	0	-0.5	-1	0.2	0.5	0.5	0.5	0.2	1.4	-0.2	-0.5	0.5
E	0.5	-0.1	-0.2	-0.3	-0.1	0.3	0	-0.1	-0.1	0.6	-0.3	-0.1	-0.1	-0.1	-0.2	0.2	0	-0.1	0.3	-0.1
K	-0.3	0.4	0.6	-0.3	-0.1	0.3	0	0	0.4	0.5	-0.5	0	0.2	-0.1	-0.1	0.3	-0.8	-0.1	0	0
R	-0.2	-0.1	-0.2	0.5	0.6	-0.2	0	0	-0.1	0.1	-0.3	-0.2	-0.1	-0.1	0.8	0	-1	-0.1	0.9	-0.1
H	-0.3	-0.1	-0.2	0.8	-0.1	-0.1	0	0	-0.1	0.2	0.8	0.5	-0.1	-0.1	-0.1	-0.4	-0.5	0.4	-0.4	-0.1
N	-0.3	-0.1	0.6	-0.3	-0.1	0.2	0	-0.1	-0.1	-0.2	-0.5	0	-0.1	0.3	0.3	0.1	0.8	-0.1	-0.4	-0.1
Q	-0.3	-0.1	0.2	-0.3	-0.1	-0.1	0	-0.1	-0.1	-0.2	1.3	1	-0.1	-0.1	-0.1	-0.3	-0.2	-0.1	0.2	-0.1
S	-0.2	-0.1	-0.2	0.9	-0.1	-0.1	0	0	-0.1	-0.2	-0.5	-0.2	-0.1	-0.1	-0.1	-0.1	1.3	-0.1	0	-0.1
T	-0.1	0	0.4	0.3	0	-0.1	0	0	-0.1	-0.1	-0.2	-0.1	0	-0.1	-0.1	0.2	0.4	0	-0.2	0
G	-0.1	0	0.4	-0.1	0	0	0	0	0	-0.1	-0.1	-0.1	0	0	0	0.2	0.3	0	-0.2	0
P	1.2	-0.1	-0.2	-0.2	-0.1	-0.2	-0.1	-0.1	0.2	-0.2	0	-0.3	-0.1	-0.1	-0.2	0.3	-0.5	0.2	0.7	-0.1
C	-0.1	0	0	0	0	0	0	0	0	0	-0.1	0	0	0	0	-0.1	0.2	0	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0211	0.6	-0.8	0.3	0.1	0.2	-0.6	-0.8	-0.6	0.1	0.2	0.6	0.2	0.4	0.4	0.5	0.1	-0.1	-0.1	0.6	-0.7
0238	0.8	-0.6	0.2	0.3	-0.7	0	-0.9	-0.6	-0.2	0	0.6	0.5	-0.6	-0.2	-0.3	0.7	1.4	-0.5	1.1	-0.5

Select residue pair below:

i_j	Score	Prob
0211_0238	0.951	0.39
0211_0235	0.879	0.32
0078_0211	0.842	0.29
0211_0250	0.826	0.28

Local Interactions:

i_j

Score

Prob

See all coupling residues
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