May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 1-300 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0208] and [L:0253]
- A F I L V M W Y D E K R H N Q S T G P C
A 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
F 0 0 -0.3 0.1 -0.1 -0.1 -0.1 -0.1 0 0 0 0 0 0 0 0 0.8 0 0 0
I -0.1 0.1 0.1 1.1 -0.1 0.7 -0.1 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1
L 0.4 0.5 0.9 0.1 0.5 -0.5 -0.3 0.7 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.4 -0.1 -0.1 -0.1
V -0.2 0.6 -0.5 1.1 -0.2 0.6 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1
M -0.1 0.4 0.5 -0.6 0.7 0 -0.1 -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0
W 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Y 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
D 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
E 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
K 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
R 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
N 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Q 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
S 0 0.1 0.5 -0.2 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
T 0 0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P 0 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
C 0 -0.1 -0.1 -0.2 -0.1 -0.1 0.5 0 0 0 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0208 -0.3 0.3 1 1.5 0.7 0.5 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 -0.3 0.2 -0.2 -0.3 -0.3 -0.1
0253 -0.1 1.5 1.2 1.4 0.8 0.8 -0.2 0.2 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.5 -0.1 -0.5 -0.5 -0.5
Select residue pair below:
i_j Score Prob
0208_0253 1.932 0.97
0208_0229 1.076 0.52
0208_0284 1.016 0.46
0208_0226 0.912 0.35
0208_0295 0.911 0.35
0038_0208 0.881 0.33
0176_0208 0.864 0.31
0208_0273 0.804 0.26
0208_0231 0.793 0.25
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...
Page generated in 0.0134 seconds.