OPENSEQ.org -1515484907- GREMLIN Submission

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PRMT5 1-300

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Coupling matrix for [T:0194] and [V:0217]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.3	-0.1	-0.4	0.1	0	0	0	0.3	0.4	1.4	-0.1	-0.1	0	-0.1	-0.1	-0.4	-0.2	-0.1	0	-0.1
F	-0.2	-0.1	-0.3	-0.3	-0.5	0	0	-0.1	0	-0.1	0	-0.1	0	0.1	-0.1	0.4	1	0	0	0.2
I	0.4	-0.1	-0.1	-0.5	-0.2	0	0	-0.2	0.4	0.8	0.2	-0.1	-0.1	-0.1	-0.1	-0.3	0.2	-0.1	0	-0.1
L	0.7	0.2	0.2	-0.5	-0.6	-0.1	0	-0.2	-0.1	-0.2	0.4	-0.1	-0.1	-0.1	0.4	1.1	-0.4	-0.1	0	-0.1
V	-0.2	-0.1	0.2	-0.2	-0.2	0	0	0.3	0	0.2	0	0	0	-0.1	-0.1	0.4	-0.2	0	0	-0.1
M	-0.2	0.7	-0.4	-0.3	-0.4	0	0	-0.2	-0.1	-0.1	0	-0.1	0	-0.1	-0.1	0.2	0.8	-0.1	0	0.4
W	-0.1	0	0.1	-0.1	0.3	0	0	0	0	-0.2	0	0	0	0	0	-0.1	-0.1	0	0	0
Y	0	0	-0.1	-0.1	-0.1	0	0	0	0	-0.1	0	0	0	0	0	-0.1	0	0	0	0
D	0.4	-0.1	-0.2	0.2	-0.4	0	0	0.8	0	-0.2	0	0	0	-0.1	0	-0.2	-0.1	0	0	0
E	-0.1	-0.1	0.9	-0.2	-0.2	0	0	-0.1	0	0.1	0	0	0	0	0	0.2	-0.1	0	0	0
K	-0.2	-0.1	-0.4	0.9	1.4	0	0	-0.2	-0.1	-0.5	0	-0.1	0	-0.1	-0.1	-0.3	-0.1	0	0	0
R	-0.2	-0.1	-0.3	-0.3	1	0	0	0.3	-0.1	0	0	-0.1	0	-0.1	-0.1	-0.3	-0.1	0.5	0	0
H	-0.1	0	-0.1	-0.1	0.4	0	0	0	0	-0.2	0	0	0	0	0	-0.1	-0.1	0	0	0
N	-0.2	-0.1	-0.3	0.1	0.4	0	0	-0.1	-0.1	0	0	-0.1	0	-0.1	-0.1	0.2	0.3	0	0	0
Q	0.1	0.3	0.4	-0.1	0	-0.1	0	-0.1	-0.1	-0.2	-0.1	0.4	0	-0.1	-0.1	0.2	-0.2	-0.1	0	-0.1
S	-0.3	-0.1	0.5	1.3	-0.3	-0.1	-0.1	-0.1	0	0.3	-0.2	0.4	0.2	0.2	0.7	-0.7	-0.2	-0.2	-0.1	-0.2
T	1.1	-0.4	0.3	1.2	0.5	0.3	-0.1	-0.1	-0.3	-0.4	-0.2	-0.2	-0.1	-0.2	-0.3	0.1	0.2	-0.2	-0.1	-0.2
G	-0.1	0.4	0.6	-0.2	0	0	0	-0.1	0	-0.3	0	-0.1	0	-0.1	0	0.2	-0.1	0	0	0
P	-0.1	-0.1	-0.1	-0.1	-0.2	0	0	-0.1	0	-0.1	0	0	0	0.8	0	-0.1	-0.1	0	0	0
C	-0.1	-0.1	-0.2	-0.2	0.1	0	0	-0.1	0	0.5	0	0	0	0	0	0.2	-0.1	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0194	0.2	-0.1	0.1	0.6	-0.2	0.1	-0.6	-0.9	-0.3	-0.1	0.1	0.2	-0.7	0.1	0.4	1.3	1.2	-0.1	-0.5	-0.3
0217	0.5	0.1	0.7	1.8	1.3	-0.6	-0.9	0.1	-0.4	1.1	-0.5	-0.4	-0.7	-0.2	-0.3	0.9	0.5	-0.7	-0.9	-0.5

Select residue pair below:

i_j	Score	Prob
0194_0217	0.876	0.32
0185_0217	0.829	0.28
0217_0241	0.779	0.24

Local Interactions:

i_j

Score

Prob

See all coupling residues
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