May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 1-300 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [H:0175] and [E:0177]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.2 -0.1 0.2 0.6 -0.1 -0.1 0 0.3 -0.1 -0.1 0.1 -0.2 -0.1 -0.2 -0.2 0.2 0.1 0.1 -0.3 -0.1
F -0.1 0 0.2 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 0 0 0 0
I 0.1 0 -0.1 0.3 -0.1 0.4 0 0 -0.2 0.2 -0.1 -0.1 0 -0.1 0 0 -0.1 -0.2 -0.1 0
L 0 -0.1 -0.1 -0.1 -0.1 0.4 0 0 -0.3 -0.1 -0.1 -0.1 0 -0.1 -0.1 0.1 0.5 -0.1 -0.1 0.5
V -0.1 0.3 -0.1 0.3 -0.1 -0.1 0 -0.1 0.1 -0.1 -0.1 -0.1 0 -0.1 0.3 0.2 -0.1 0.1 -0.2 -0.1
M -0.1 0 0 0 0 0 0 0 -0.1 0.2 0 0 0 0 0 -0.1 0.3 -0.1 0 0
W -0.1 0 0 0 0 0 0 0 -0.1 0.2 0 0.3 0 -0.1 -0.1 -0.1 0 -0.1 0 0
Y -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 0 -0.1 0.4 0 0.1 0
D -0.1 -0.1 0.1 0 -0.3 0.2 0 -0.1 0.3 0.2 0.5 -0.2 -0.1 0.3 -0.3 0 0.1 0.2 -0.2 0.1
E 0.1 -0.2 0.1 0 0.6 0.1 -0.1 -0.1 0.3 -0.4 0 -0.3 -0.1 -0.5 0.1 0.5 -0.2 0.1 0.5 -0.2
K 0 -0.1 0.4 -0.2 0.7 -0.1 0 -0.1 -0.5 0.1 -0.2 -0.1 -0.1 0.6 -0.2 0.3 -0.3 -0.3 0.4 -0.1
R -0.3 -0.1 -0.2 -0.2 0.4 -0.1 0 -0.1 0.2 0.7 0 0.4 0 -0.2 0.7 -0.4 -0.2 -0.2 -0.2 -0.1
H 0.2 0 -0.1 0 0 0 0 0 0.1 0 0 -0.1 0 -0.1 -0.1 -0.2 0.3 -0.1 -0.1 0
N -0.2 -0.1 -0.1 0.2 -0.1 -0.1 0 -0.1 0.5 -0.2 0.2 -0.1 0 0.3 0.2 -0.1 -0.1 0.1 -0.1 -0.1
Q -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 0 -0.1 -0.2 0.2 -0.1 0.6 0 -0.2 0.6 -0.1 -0.1 0.1 -0.2 0.4
S 0.3 0.3 0.3 -0.1 -0.2 -0.1 0 -0.1 -0.1 -0.3 0.1 -0.1 -0.1 0.2 -0.2 0.1 0.2 -0.3 0.6 -0.1
T 0.5 -0.1 -0.2 -0.2 -0.2 -0.1 0 0.3 0.3 0.3 -0.2 0.2 0.4 -0.3 -0.2 -0.1 -0.2 0.2 0.1 -0.1
G 0.4 -0.1 -0.2 0.1 0.2 -0.1 0 -0.2 -0.5 -0.1 0.1 0.1 -0.1 0.2 0.1 0.1 0 0.5 0.2 -0.1
P 0.3 -0.1 -0.1 -0.1 -0.2 -0.1 0 0.1 0.7 -0.4 -0.2 -0.1 0 0.6 -0.2 0.3 0 -0.2 0.1 -0.1
C -0.1 0 0 0 0 0 0 0 0.1 -0.1 0 0 0 0 0 -0.1 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0175 0.4 -0.6 -0.2 -0.2 0 -0.4 -0.4 -0.5 0.3 0.5 0.5 0 -0.3 0.1 0.1 0.3 0.5 0.6 0.2 -0.6
0177 0.4 -0.5 -0.1 0 0.1 -0.3 -0.9 -0.3 0.9 1 -0.1 -0.1 -0.8 0.1 0.3 0.8 0 0.1 0.1 -0.3
Select residue pair below:
i_j Score Prob
0174_0177 0.950 0.39
0177_0182 0.818 0.27
0177_0181 0.798 0.25
Local Interactions:
i_j Score Prob
0177_0178 1.536 0.88
0175_0177 1.194 0.64
0176_0177 1.174 0.62
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...
Page generated in 0.0116 seconds.