May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 1-300 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [T:0173] and [T:0176]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.3 0 -0.1 -0.1 0.2 -0.1 0 0 0.3 -0.1 -0.2 -0.2 -0.1 -0.1 -0.2 -0.2 0.1 0.3 0.6 0.1
F 0.1 0 0.2 -0.2 0.3 -0.1 -0.1 0 0.1 0.4 -0.3 -0.3 -0.1 0.2 0.5 0 -0.3 -0.4 0.1 0
I 0.2 0 0 0 0 0 0 0 -0.1 0.3 -0.1 0 0 0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0
L -0.4 0 -0.1 0.3 -0.2 -0.1 0 0 -0.3 0.5 -0.2 -0.2 -0.1 0.5 0.7 0.4 0.1 -0.1 -0.2 0
V 0 0 0 0.2 -0.1 -0.1 0.4 0 -0.1 0.1 -0.1 0.5 -0.1 0.1 -0.2 0.2 -0.3 -0.3 0 0
M -0.1 0 0 0 0 0 0 0 0.4 -0.2 0 0 0 0 0 0 -0.1 -0.1 0 0
W -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
Y -0.1 0 0 -0.1 -0.1 0 0 0 -0.1 -0.2 -0.1 -0.1 0 0.3 -0.1 -0.1 -0.1 0.6 -0.1 0
D -0.4 0 0.4 -0.1 -0.1 0 0 0 -0.2 0.1 0.6 -0.1 -0.1 0.4 -0.2 -0.1 0.1 -0.2 0.3 0
E 0.7 0 0.1 0.2 0.2 -0.1 -0.1 0 -0.4 -0.6 -0.2 -0.1 -0.1 0.1 0.3 0.1 0.1 0 -0.1 0
K 0 0 0 -0.1 -0.1 0 0 0 -0.2 0 0.5 0.2 -0.1 -0.1 0.2 -0.1 0.2 -0.2 -0.1 0
R -0.2 0 0 0.3 -0.1 0 0 0 -0.1 0.2 -0.1 -0.1 0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0
H -0.1 0 0 0 -0.1 0 0 0 0.1 0 -0.1 0 0 0.1 -0.1 -0.1 -0.1 0.2 -0.1 0
N 0.1 0 0.3 0.3 -0.1 0 0 0 -0.2 0.1 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 -0.2 -0.1 -0.1 0
Q 0 0 -0.1 -0.1 -0.1 0 0 0 -0.2 0 -0.1 -0.1 0 -0.1 0.1 0.4 0.2 0 0.2 0
S -0.1 0 -0.1 0 -0.2 0.2 -0.1 0 0.5 -0.4 0.2 0.4 -0.1 -0.3 0 -0.2 0.4 0.4 0.1 0
T -0.1 0 -0.1 -0.2 0.2 -0.1 -0.1 0 0.6 0.6 0.1 -0.2 -0.1 -0.2 -0.2 0.1 0.1 0.1 -0.2 0
G 0.4 0 -0.1 -0.1 -0.1 0.4 0 0 0.1 0.2 -0.1 -0.1 -0.1 0.1 -0.2 0 0.1 0.1 -0.2 0
P 0.1 0 0 -0.1 -0.1 0 0 0 0.3 -0.3 -0.1 0.6 0 -0.1 -0.1 -0.1 -0.2 -0.1 0.3 0
C -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 0 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0173 0.5 0.1 -0.4 0.5 0.4 -0.6 -0.8 -0.3 0.2 0.3 0.2 -0.3 -0.4 0 0.1 0.7 0.5 0.4 -0.3 -0.8
0176 0.8 -0.7 -0.3 0.1 0 -0.5 -0.6 -0.7 0.4 0.7 0 -0.2 -0.3 0.4 0.4 0.4 0.4 0.5 0.4 -0.7
Select residue pair below:
i_j Score Prob
0170_0173 1.368 0.78
0173_0176 0.869 0.31
Local Interactions:
i_j Score Prob
0172_0173 1.750 0.95
0171_0173 1.428 0.82
0173_0174 1.414 0.81
0173_0175 1.129 0.57
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...
Page generated in 0.0153 seconds.