May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 1-300 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [I:0168] and [P:0172]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 0 -0.1 0.1 0 -0.1 0 0 -0.2 0 -0.1 0.1 -0.1 -0.1 0.5 -0.3 -0.1 0 0.4 0
F -0.1 0 0 0 0 0 0 0 0.1 0.2 0 -0.1 0 -0.1 0.4 -0.1 -0.1 0.4 -0.3 0
I 0 0 0.2 -0.1 -0.1 -0.1 0 0 0 0.3 -0.1 -0.1 -0.1 -0.2 -0.1 -0.2 -0.1 -0.1 0.8 0
L -0.1 0 0 -0.1 0 0 0 0 0.2 0.4 0 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 0 0
V -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0 0.5 0 0.3 -0.1 0 -0.1 -0.2 0.2 0.6 -0.1 -0.2 0
M 0 0 0 0 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0.3 0 -0.2 0
W 0 0 0 0 0 0 0 0 0.1 -0.1 0 0 0 0 0 0 0 0 0.2 0
Y -0.1 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 -0.1 0.4 0 -0.2 0
D -0.2 0 -0.1 -0.1 -0.1 -0.1 0 0 -0.1 0.4 0.1 0.3 -0.1 -0.1 0 0.5 -0.1 -0.1 0.1 0
E 0.6 0 -0.1 -0.1 0.3 0.3 0 -0.1 -0.3 0.1 -0.1 -0.1 -0.1 0.2 -0.3 0.2 -0.3 -0.1 0.5 0
K -0.1 0 0 0.4 0 0 0 0 -0.1 -0.1 0 0 0 0 -0.1 -0.1 0.4 0 -0.2 0
R 0.4 0 0.2 -0.1 0.3 -0.1 0 -0.1 -0.2 -0.4 -0.1 -0.1 -0.1 0.2 -0.3 0 -0.1 0.1 0.5 0
H 0.5 0 0 0.4 0 0 0 0 -0.1 -0.2 0 0 0.4 -0.1 -0.1 -0.1 -0.1 0 -0.3 0
N -0.1 0 0 0 0 -0.1 0 0 -0.1 -0.2 0.8 -0.1 0 0.3 -0.1 0.2 -0.1 0 -0.1 0
Q -0.1 0 0 0 0 0 0 0 -0.1 0.3 0 0 0 0 0.3 -0.1 -0.1 0 -0.2 0
S 0.1 0 -0.1 -0.1 -0.1 0.2 0 0 0 0.6 -0.1 -0.1 -0.1 0.2 0.2 0.2 -0.2 -0.1 -0.5 0
T -0.1 0 0 0 0 -0.1 0 0 0.7 0.2 -0.1 -0.1 0 -0.1 -0.1 -0.1 -0.1 0 0.2 0
G -0.1 0 0.3 -0.1 -0.1 -0.1 0 -0.1 0.1 -0.3 -0.2 0.3 -0.1 0.1 0.2 0.1 -0.2 0.1 0.6 0
P -0.1 0 0 0 0 0.3 0 0 0.1 -0.2 -0.1 0 0 -0.1 -0.1 -0.1 -0.1 0 0.2 0
C 0 0 0 0 0 0 0 0 0 -0.1 0 0 0 0 0 0 0 0 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0168 0.4 -0.2 0.2 0.1 0.3 -0.6 -0.6 -0.8 0.2 0.5 -0.4 0.6 -0.1 0 -0.5 0.7 0 0.9 0.1 -0.8
0172 0.2 -0.6 -0.2 -0.1 -0.3 -0.2 -0.6 -0.3 0.3 0.9 -0.1 0 -0.4 0 0.3 0.3 0 -0.2 1.3 -0.6
Select residue pair below:
i_j Score Prob
0167_0172 0.874 0.32
0172_0296 0.801 0.26
0169_0172 0.797 0.25
0168_0172 0.791 0.25
Local Interactions:
i_j Score Prob
0172_0173 1.750 0.95
0171_0172 1.384 0.79
0170_0172 1.144 0.59
0172_0174 0.857 0.30
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...
Page generated in 0.0186 seconds.