OPENSEQ.org -1515484907- GREMLIN Submission

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PRMT5 1-300

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Coupling matrix for [A:0115] and [S:0288]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.1	0.3	-0.6	-0.8	0	0.1	0.1	-0.5	-0.1	-0.3	-0.3	0.1	0.5	0.4	1.3	1	-0.1	0.2	-0.1	-0.3
F	0	-0.1	0	-0.1	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0
I	0.4	0.3	-0.1	-0.2	0	0	0.1	-0.2	0	-0.2	0	-0.1	-0.1	-0.1	-0.1	-0.1	0.4	-0.1	0	0
L	-0.1	0.2	-0.1	-0.2	0	0	-0.3	0.2	0	-0.2	0	-0.1	-0.1	-0.1	-0.1	-0.1	0.9	-0.1	0	0
V	-0.1	-0.3	-0.1	-0.2	-0.1	0	0.9	0.1	0	-0.3	-0.1	-0.1	-0.1	-0.1	-0.2	-0.1	-0.1	0.5	0	0.5
M	-0.1	0.5	-0.1	-0.1	0	0	0.1	0.2	0	-0.1	0	-0.1	-0.1	-0.1	-0.1	0	-0.1	0	0	0
W	0	-0.1	0	-0.1	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0
Y	0	-0.1	0	-0.1	0	0	0.3	-0.1	0	-0.1	0	0	0	0	-0.1	0	0	0	0	0
D	0	-0.2	-0.1	-0.1	0	0	-0.2	0.3	0	-0.1	0	-0.1	0	0	-0.1	0	0	0	0	0
E	0.3	-0.4	1.9	0.4	-0.1	-0.1	-0.4	-0.5	0	-0.3	-0.1	0.2	-0.1	-0.1	0.3	-0.1	-0.1	-0.1	0	-0.1
K	-0.1	0.1	-0.1	0.9	-0.1	0.5	-0.1	-0.3	0	-0.4	0	-0.1	-0.1	-0.1	-0.3	-0.1	0.4	-0.1	0	0
R	-0.1	-0.3	-0.1	1.6	-0.1	0	0.6	-0.2	0	-0.4	-0.1	-0.1	-0.1	-0.1	-0.3	-0.1	-0.1	-0.1	0	0
H	0	0.7	0	-0.1	0	0	-0.2	-0.2	0	-0.1	0	0	0	0	-0.1	0	0	0	0	0
N	-0.2	0.4	-0.2	0.1	-0.1	-0.1	0.1	-0.3	0	2	0.4	-0.1	-0.3	-0.2	-0.6	-0.1	-0.1	-0.1	0	-0.1
Q	-0.1	-0.2	0.4	0.2	0.5	0	-0.3	0.3	0	-0.2	0	-0.1	-0.1	-0.1	-0.1	0	-0.1	0	0	0
S	-0.2	-0.2	-0.6	-0.9	-0.3	-0.3	0.1	0.9	-0.1	1.2	-0.4	0.4	0.5	0.1	0.9	-0.1	-0.5	0.2	-0.1	-0.2
T	0.4	-0.1	-0.2	-0.1	-0.1	-0.1	0	0.2	0	0.5	0.8	0.2	0.2	0.2	-0.4	-0.2	-0.2	-0.2	0	-0.1
G	-0.1	0.2	0.3	0.4	-0.1	-0.1	0.2	0.2	0	-0.3	-0.1	-0.1	-0.1	-0.1	0.3	-0.1	-0.1	-0.1	0	0
P	0	-0.1	0	-0.1	0	0	-0.1	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0
C	-0.1	-0.5	-0.2	-0.3	0.4	0	-0.1	0.2	0	0.1	-0.1	0.3	0.3	0.3	-0.2	-0.1	-0.1	-0.1	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0115	2	-1	-0.2	-0.2	0	-0.3	-1	-0.8	-0.6	0.4	0.1	0.1	-0.6	0.4	-0.2	2.1	1	0.3	-1	0.3
0288	-0.1	0.4	0.2	0.6	-0.3	-0.5	0.8	0.5	-0.9	1.1	-0.3	0.1	0.3	-0.1	0.1	-0.2	0	-0.4	-0.9	-0.7

Select residue pair below:

i_j	Score	Prob
0115_0288	0.818	0.27
0115_0291	0.812	0.27

Local Interactions:

i_j

Score

Prob

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