OPENSEQ.org -1515484907- GREMLIN Submission

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PRMT5 1-300

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Coupling matrix for [S:0103] and [A:0106]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	-0.1	0	0.4	0.1	0.3	0.4	0	-0.1	-0.1	-0.2	-0.1	0.3	-0.2	-0.1	0	0.2	0	0.2	0	-0.3
F	0.1	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
I	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
L	0.2	0	-0.1	-0.1	-0.1	0	0	0.4	0	0	0	0	0	0	0	0	-0.1	0	0	0
V	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
M	-0.1	0	-0.1	0	0	0	0	0	0	0	0.4	0	0	0	0	0	-0.1	0	0	0
W	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Y	0.3	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
D	-0.1	0	-0.1	0.4	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	0	0
E	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
K	0.2	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
R	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
H	-0.1	0	-0.3	-0.2	-0.2	0.3	0	-0.1	-0.1	-0.1	0	0	0.3	0.3	0	-0.1	-0.3	-0.1	0	0.8
N	-0.3	0	0.4	0.4	-0.2	-0.1	0	-0.1	0	0	0	0	-0.1	0	0	0.4	0.2	0	0	-0.1
Q	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
S	0.8	-0.2	0.3	-0.3	0.2	-0.2	-0.2	0	0.1	0.4	-0.2	-0.3	0.2	-0.1	-0.2	-0.1	0.6	0.1	-0.2	-0.1
T	0.1	0	0	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
G	-0.3	0	-0.1	0.2	0.4	-0.1	0	0	0	0	0	0	-0.1	0	0	-0.1	0.7	-0.1	0	-0.1
P	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
C	0.3	0	0.3	0.2	0.1	-0.1	0	0	0	-0.1	0	0	-0.1	-0.1	0	-0.1	-0.2	-0.1	0	-0.1

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0103	1.3	-0.2	-0.4	0.1	-0.4	-0.1	-0.4	-0.2	-0.1	-0.4	-0.1	-0.4	0.3	0.6	-0.4	0.8	-0.2	0.4	-0.4	0.2
0106	1	-0.5	0.7	0.7	0	0.2	-0.5	0	-0.3	-0.2	-0.2	-0.2	0	-0.1	-0.5	0.1	0.7	-0.1	-0.5	0.1

Select residue pair below:

i_j	Score	Prob
0089_0106	1.388	0.80
0106_0138	1.021	0.46
0106_0265	0.999	0.44
0091_0106	0.923	0.36
0060_0106	0.837	0.29
0103_0106	0.783	0.24
0063_0106	0.781	0.24

Local Interactions:

i_j

Score

Prob

See all coupling residues
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