May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org

PRMT5 1-300 Return to Main Page

Instructions
  • Use the menu to the right to browse the coupling matrix.

Coupling matrix for [S:0069] and [L:0071]
- A F I L V M W Y D E K R H N Q S T G P C
A -0.2 -0.2 -0.3 0.5 -0.2 0.1 -0.1 -0.1 0 0 0.4 -0.3 -0.1 -0.1 -0.1 0.6 0.8 0 0 -0.1
F 0 0 0 -0.1 -0.2 0 0 0 0 0 0 0 0 0 0 0 0.1 0 0 0
I 0 0 -0.1 -0.2 -0.2 0 0 0 0 0 0 0 0 0 0 0.5 -0.2 0 0 0
L 0 -0.1 -0.1 -0.3 -0.4 -0.1 0 0 0 0 0 -0.1 0 0 0 0.8 0.4 0 0 0
V -0.1 -0.1 -0.1 -0.4 -0.1 -0.1 0 0 0 0 0 -0.1 0 0 0 -0.1 1.3 0 0 0
M 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
W 0 0 0 -0.1 -0.1 0 0 0 0 0 0 0 0 0 0 0 -0.1 0 0 0
Y 0 0 -0.1 -0.2 -0.2 0 0 0 0 0 0 0.5 0 0 0 0 -0.2 0 0 0
D -0.2 -0.2 0.3 -0.1 1.6 -0.3 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 -0.1 -0.1 -0.1 -0.3 0.7 -0.1 -0.1 0.3
E 0.6 -0.4 -0.5 -0.9 0.9 0 -0.1 -0.2 -0.1 -0.1 -0.1 -0.3 0.4 -0.1 0.3 0.1 1.1 -0.1 -0.1 0.3
K -0.1 -0.2 -0.2 0.1 0.2 -0.1 0 -0.1 0 0 0 -0.1 0 0 -0.1 0.3 0.7 0 0 -0.1
R 0 -0.1 -0.1 0.2 -0.3 -0.1 0 0 0 0 0 -0.1 0 0 0 -0.1 0.4 0 0 0
H 0 -0.1 -0.1 -0.3 0.4 -0.1 0 0 0 0 0 0.4 0 0 0 -0.1 0 0 0 0
N -0.1 -0.1 -0.2 0.1 0.7 -0.1 0 0.9 0 0 0 -0.1 0 0 -0.1 -0.1 -0.6 0 0 -0.1
Q -0.1 0.3 1.3 1.1 -0.4 -0.2 -0.1 -0.2 0 0 -0.1 -0.2 0 -0.1 -0.1 -0.2 -0.8 0 0 -0.1
S -0.4 0.6 -0.4 1.8 -0.5 1.7 -0.2 0.1 -0.1 -0.1 -0.2 0 -0.2 0.2 -0.3 0.1 -0.7 -0.1 -0.1 0.1
T 0.1 -0.1 0.2 -0.2 -0.2 0.3 0 -0.1 0 0 0 1.1 0 0 -0.1 -0.2 -0.3 0 0 -0.1
G -0.1 -0.1 -0.1 -0.1 0.8 -0.1 0 -0.1 0 0 0 0.3 0 0 0.5 -0.2 -0.6 0 0 -0.1
P 0.6 0.5 0.9 0.5 0.1 -0.4 0.5 -0.2 -0.1 -0.1 -0.1 -0.4 -0.1 -0.1 -0.1 -0.4 -0.1 -0.1 -0.1 -0.2
C 0 0.5 -0.1 0.2 -0.3 -0.1 0 0 0 0 0 -0.1 0 0 0 -0.1 -0.3 0 0 0

Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0069 0.8 -0.8 -0.7 -0.2 -0.2 -0.9 -0.9 -0.7 1 1.1 0.2 -0.4 -0.2 0.1 0.2 1.6 0.3 0 1.2 -0.6
0071 -0.2 0.1 0.7 2.1 2.2 0.6 -0.6 -0.4 -1 -1 -0.7 0.3 -0.7 -0.8 -0.5 0.5 2.3 -1 -1 -0.4
Select residue pair below:
i_j Score Prob
0030_0069 0.869 0.31
Local Interactions:
i_j Score Prob
0069_0071 0.975 0.42
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...

Page generated in 0.013 seconds.