May 4, 2021 - We are working on upgrading the webserver, some pages may not work.
OPENSEQ.org
PRMT5 1-300 Return to Main Page
Instructions
  • Use the menu to the right to browse the coupling matrix.
Coupling matrix for [F:0050] and [F:0054]
- A F I L V M W Y D E K R H N Q S T G P C
A 0.1 0.1 -0.2 -0.1 -0.3 -0.1 -0.2 0.3 -0.1 -0.1 -0.2 -0.1 -0.1 -0.1 -0.2 -0.2 1 0.3 0.2 -0.1
F 0.3 1 0.2 0.2 0.9 -0.2 -0.8 0.6 0.3 -0.3 -0.1 -0.2 -0.1 0.1 -0.4 -0.1 -0.1 0.5 -0.1 -0.3
I -0.1 -0.4 0 -0.1 -0.1 0 -0.1 0.5 0 0 0.5 0 0 0 -0.1 0 0 0 -0.1 0
L 0.7 0.1 -0.3 -0.3 0.5 -0.1 -0.4 -0.2 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 -0.3 0.3 -0.2 0.3 0.9 0.3
V -0.2 0.5 0.3 -0.2 -0.4 -0.1 0.5 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.4 -0.1 -0.1 -0.1 -0.1 0.2 -0.1
M -0.1 -0.2 -0.1 -0.1 -0.1 0 -0.1 -0.1 0 0 -0.1 0.2 0 0 0.5 0 0 0 -0.1 0
W -0.2 -0.8 -0.2 -0.2 -0.3 0 2.5 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.1 0.2 -0.1 -0.1 -0.1 -0.1
Y -0.3 0.3 0.2 1.4 0.9 0.3 -0.8 -0.5 -0.4 0.1 0.2 0.1 0.3 -0.6 0 0.3 -0.1 -0.4 -0.3 0.7
D -0.1 -0.2 -0.1 0.4 0.3 0 -0.1 -0.1 0 0 -0.1 0 0 0 -0.1 -0.1 0 0 -0.1 0
E 0.2 -0.2 -0.1 -0.1 -0.1 0 0.4 -0.1 0.4 0 -0.1 0 0 0 -0.1 -0.1 -0.1 -0.1 -0.1 0
K -0.1 0.2 -0.1 -0.1 -0.2 0 -0.1 -0.1 0 0 -0.1 0.7 0 0 0.2 -0.1 -0.1 0 -0.1 0
R 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
H 0.3 1 0.2 0.1 -0.3 -0.1 -0.3 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 -0.2 0.2 -0.2 -0.1 -0.2 -0.1
N -0.1 -0.1 0.5 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0
Q -0.1 -0.2 -0.1 -0.1 -0.2 0 -0.1 0.4 -0.1 0 -0.1 0 0 0.9 -0.1 -0.1 -0.1 -0.1 -0.1 0
S -0.2 -0.1 -0.1 -0.2 -0.1 0 -0.1 -0.1 0.4 0.4 -0.1 -0.1 -0.1 -0.1 0.3 -0.1 -0.1 -0.1 0.4 -0.1
T 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
G 0 -0.1 0 0 -0.1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
P -0.1 -0.3 -0.1 -0.2 -0.1 0 -0.1 -0.1 -0.1 -0.1 -0.1 -0.1 0.5 -0.1 1.1 -0.1 -0.1 -0.1 -0.1 -0.1
C -0.1 0.1 0 -0.1 -0.1 0 -0.1 0 0 0 0 0 0 0 -0.1 -0.1 0.5 0 -0.1 0
Conservation matrix (aka PSSM)
- A F I L V M W Y D E K R H N Q S T G P C
0050 0.1 1.8 -0.4 0.8 -0.1 -0.5 0.2 1.8 -0.4 -0.2 -0.2 -0.8 0.2 -0.6 -0.3 -0.1 -0.8 -0.8 -0.3 -0.5
0054 0.3 0.3 0.4 0.2 0.9 -0.6 0 0 -0.2 -0.2 0 -0.2 -0.4 -0.3 0.1 0.2 0 -0.2 0.2 -0.2
Select residue pair below:
i_j Score Prob
0050_0054 1.169 0.61
0050_0097 1.067 0.51
0042_0050 0.973 0.41
Local Interactions:
i_j Score Prob
See all coupling residues
Download raw data
Renumber residues to start with:
Position: 1 2 3 4 5 ...
Sequence: M A A M A ...
Page generated in 0.0284 seconds.