OPENSEQ.org -1515484907- GREMLIN Submission

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PRMT5 1-300

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Coupling matrix for [H:0047] and [L:0072]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0.5	0	-0.1	0.2	0.5	-0.1	0	0	0	-0.1	0	-0.1	0	-0.2	-0.1	-0.1	-0.2	-0.1	-0.1	-0.1
F	-0.1	0	-0.1	-0.2	0.1	0	0	0	0	0.4	0	-0.1	0	0.4	-0.1	-0.1	-0.1	-0.1	0	0
I	0.4	0	-0.1	-0.2	-0.3	0	0	0	0	-0.1	0	0.5	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0.5
L	-0.1	0	-0.1	0.4	-0.1	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0
V	0	0	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
M	0	0	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
W	0	0	-0.1	0	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Y	-0.1	0	-0.1	-0.1	-0.2	0	0	0.5	0	-0.1	0	0	0	-0.1	-0.1	-0.1	-0.1	0.5	-0.1	0
D	-0.3	0	0.4	-0.5	1.1	0.4	0	-0.1	-0.1	-0.1	0.4	-0.1	-0.1	-0.1	-0.1	-0.2	-0.2	-0.2	-0.1	-0.1
E	-0.1	0	0.4	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	-0.1	-0.1	0	0	0
K	-0.2	0	-0.3	0.2	0	-0.1	0	0.4	-0.1	0.3	0.2	-0.1	-0.1	0.1	0.6	0.2	-0.3	-0.1	-0.2	-0.1
R	0.7	0	-0.3	0.2	0.1	-0.1	0	-0.1	-0.1	-0.1	0.4	-0.1	-0.1	-0.2	0.2	-0.1	0	-0.1	-0.1	-0.1
H	0.4	-0.1	0.6	0.9	0.9	-0.3	-0.1	-0.2	0.1	0.1	-0.2	-0.2	-0.2	-0.6	0	0.2	-0.1	-0.2	-0.3	-0.6
N	-0.4	-0.2	-0.1	-0.3	0.2	0.1	-0.1	-0.3	-0.5	-0.6	-0.5	0.1	-0.6	1.4	-0.6	1.2	0.1	1.2	0.1	0.8
Q	-0.1	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0.5	-0.1	-0.1	-0.1	-0.1	0	-0.1	-0.1
S	0.2	-0.1	-0.2	0.2	0.4	-0.1	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.2	0.1	-0.3	0.1	-0.3	-0.2	0.7	0.3
T	-0.5	0.3	-0.4	0.1	-0.8	-0.2	-0.1	-0.1	0.9	0	0	-0.1	0.6	-0.3	-0.3	0.1	1.5	-0.2	0.8	-0.1
G	0.2	0	-0.1	-0.1	-0.2	0	0	0	0	-0.1	-0.1	-0.1	-0.1	-0.2	1.8	-0.2	-0.2	-0.1	-0.1	-0.1
P	-0.2	0	0.9	-0.2	0	-0.1	0	-0.1	-0.1	0.7	-0.1	-0.1	0.4	-0.1	-0.1	-0.2	-0.2	-0.1	-0.1	-0.1
C	-0.1	0	-0.1	0.1	-0.2	0.5	0	0	0	0	0	0.5	0	-0.1	-0.1	-0.1	-0.1	-0.1	-0.1	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0047	0.1	-0.2	-0.2	-0.6	-0.8	-0.8	-0.8	-0.4	0.2	-0.6	0.5	0.2	0.5	2	-0.6	0.3	1.5	-0.1	0.2	-0.3
0072	0.4	-0.6	0.2	0.1	0.9	-0.2	-0.8	-0.4	-0.1	0.1	-0.2	-0.2	-0.3	0.1	0.5	0.4	-0.1	0.3	0.2	0

Select residue pair below:

i_j	Score	Prob
0047_0052	1.419	0.82
0047_0068	1.106	0.55
0047_0072	0.874	0.32

Local Interactions:

i_j

Score

Prob

See all coupling residues
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