OPENSEQ.org -1515484907- GREMLIN Submission

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PRMT5 1-300

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Coupling matrix for [L:0020] and [L:0041]

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
A	0	0	0.7	-0.2	-0.4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
F	1.1	0.4	-0.2	-0.4	0.2	-0.1	0	0	-0.1	0	0	0	0	0	-0.1	0	0.2	-0.1	-0.1	-0.1
I	-0.2	-0.1	0.3	-0.4	0.4	0.3	0	0	-0.1	0	0	0	0	0	-0.1	0	-0.1	0.3	-0.1	0.4
L	-0.3	-0.1	0.3	1.2	0.2	-0.2	0	0	-0.1	0	0	0	0	0	-0.1	0	-0.1	0.4	-0.1	-0.1
V	-0.2	-0.1	-0.1	1	0.2	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	-0.1
M	-0.1	0	-0.1	0	0.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
W	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Y	0.3	-0.1	0.3	0.4	-0.3	-0.1	0	0	0	0	0	0	0	0	0	0	0	-0.1	0	-0.1
D	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
E	0	0	0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
K	0	0	0.2	-0.1	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
R	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
H	0	0	-0.2	-0.1	0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
N	0	0	-0.1	-0.1	-0.1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Q	-0.1	0	-0.3	-0.3	0.5	-0.1	0	0	0	0	0	0	0	0	0.5	0	0	0	0	0
S	0	0	-0.2	-0.1	-0.2	0.5	0	0	0	0	0	0	0	0	0	0	0	0	0	0
T	0	-0.1	0.2	-0.7	0.5	-0.3	0	0	0.5	0	0	0	0	0	-0.1	0	-0.1	-0.1	0.4	0.3
G	0	0	-0.3	-0.1	0.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
P	0	0	-0.2	0.3	-0.2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
C	-0.1	0	0.6	-0.1	-0.3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Conservation matrix (aka PSSM)

-	A	F	I	L	V	M	W	Y	D	E	K	R	H	N	Q	S	T	G	P	C
0020	-0.2	1.1	1	1.3	0.6	-0.1	-0.7	0.4	-0.7	-0.3	-0.5	-0.7	-0.4	-0.7	0.2	-0.4	0.8	-0.4	-0.4	-0.2
0041	0.6	-0.1	1.4	1.2	1.4	0.3	-0.5	-0.5	-0.2	-0.5	-0.5	-0.5	-0.5	-0.5	-0.2	-0.5	-0.1	-0.1	-0.3	-0.1

Select residue pair below:

i_j	Score	Prob
0033_0041	1.448	0.83
0041_0135	0.957	0.40
0020_0041	0.875	0.32
0041_0094	0.870	0.32
0041_0130	0.821	0.27
0041_0095	0.781	0.24

Local Interactions:

i_j

Score

Prob

See all coupling residues
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